Amycolatopsis rhabdoformis: VSH64_28330
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Entry
VSH64_28330 CDS
T09694
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00300
Lysine biosynthesis
arhd00470
D-Amino acid metabolism
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01120
Microbial metabolism in diverse environments
arhd01230
Biosynthesis of amino acids
Module
arhd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VSH64_28330 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VSH64_28330 (lysA)
Enzymes [BR:
arhd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VSH64_28330 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WSE26785
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All DBs
Position
complement(6176025..6177455)
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AA seq
476 aa
AA seq
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MAHPAGPRHADVYPHADASGFPPASAEELDKLPAKVWPRNTYRAGDGIVRIAGMDVRDLA
ETYGTPLFVVDEADFKSRCADYAEAFDDPALVHYASKAFLSIEIARWVAEQGLSLDVCSG
GELAVAQRADFPAERITFHGNNKSLAELEAAVEAGVGTVVVDSYYEIARLAEVAARREVV
QAVLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNASSLKLVGLHSHIG
SQIFDADGFEVAARRVVGLLADLAKEHGRELLDQLNIVDLGGGFGIAYTEKDNPPPPAQM
ITQIREIVRKECAYADLPVPRIAGEPGRAIAGPGTFTLYEVGTIKDVALGDNTTRRYVSV
DGGMSDNIRTALYDAVYDCRVVSRSAGDGEEPVIATLSRVVGKHCESGDIVVRDCWLPDT
LAPGDLLAVAATGAYCYSMASGYNRQPRPAVVAVRNGSARVLLRRETTDDMLRLEV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccccgcgggcccccgccacgccgacgtctacccccatgccgacgcctccggg
ttcccgcccgcgagtgcggaggaactcgacaagctgcccgcgaaagtgtggccgcgcaac
acctatcgcgccggtgacggcatcgtgcgcatcgccggcatggacgtgcgcgacctcgcc
gagacctacggcacgccgctgttcgtggtcgacgaggccgacttcaagtcccgctgcgcc
gactacgccgaggcgttcgacgacccggcgctggtgcactacgcctcgaaggcgttcctg
tcgatcgagatcgcccgctgggtggccgagcagggcctgagcctcgacgtgtgcagcggc
ggcgagctcgccgtggcgcagcgcgcggacttccccgccgagcggatcacgttccacggc
aacaacaagtcgctcgcggagctcgaagcggccgtggaggccggcgtcggcaccgtggtc
gtggactcgtactacgagatcgcgcgcctggccgaggtcgccgcgcgccgcgaggtcgtg
caggcggtgctcgtgcgcgtgacggtcggagtcgaggcccacacgcacgagttcatcgcg
accgcgcacgaagaccagaagttcggtttctcgctggcttccggcgacgcggccgaggcg
gtgcgccgtgtgctcaacgcgtcctcgctcaagctcgtgggcctgcacagccacatcggc
tcgcagatcttcgacgccgacggcttcgaggtcgccgcgcgccgcgtggtcggcctgctc
gccgacctcgcgaaggaacacggccgcgaactgctcgaccagctgaacatcgtggacctc
gggggcggcttcggcatcgcgtacaccgagaaggacaacccgccgccgcccgcgcagatg
atcacgcagatccgcgagatcgtgcgcaaggaatgcgcgtacgccgacctgcccgtgccg
cgcatcgcgggcgagccgggccgcgcgatcgccgggccgggcaccttcacgctctacgag
gtcggcaccatcaaggacgtcgcgctcggtgacaacaccacccgccgctacgtgagcgtc
gacggcggcatgagcgacaacatccgcacggcgctctacgacgccgtgtacgactgccgg
gtggtttcccgctcggccggtgacggtgaagagcccgtgatcgccactctgtcccgagtc
gtgggaaaacactgtgaatccggcgacatcgtcgtccgagactgctggctacccgacact
cttgctcccggcgacctgctggccgtcgcggcgaccggtgcctactgctactccatggcg
agtgggtacaaccggcagccgcgcccggcggtggtggccgtgcgcaacggcagcgcccgc
gtgctgctgcggcgggagacgacggacgacatgctgcgcctggaggtttga
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