Amycolatopsis rhabdoformis: VSH64_28705
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Entry
VSH64_28705 CDS
T09694
Name
(GenBank) NPCBM/NEW2 domain-containing protein
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00052
Galactose metabolism
arhd00561
Glycerolipid metabolism
arhd00600
Sphingolipid metabolism
arhd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
VSH64_28705
09103 Lipid metabolism
00561 Glycerolipid metabolism
VSH64_28705
00600 Sphingolipid metabolism
VSH64_28705
Enzymes [BR:
arhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
VSH64_28705
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase_2
NPCBM
Melibiase_C
NPCBM_assoc
Melibiase_2_C
Melibiase
Glyco_hydro_97
TRAPPC13_C
N_BRCA1_IG
Motif
Other DBs
NCBI-ProteinID:
WSE26854
LinkDB
All DBs
Position
6254628..6256598
Genome browser
AA seq
656 aa
AA seq
DB search
MRRLVGLLAAACLTTGLATALTTSVAEAAPAPRSAQQAAGALPPMGWNSWNKFGCNINEE
LIRETADAIVSSGLKDAGYQYVNIDDCWAEQNRNAEGKFEPNHERFPSGIKALADYVHAK
GLKLGIYTSAGTQTCAKTMPGALDHEDVDAQTFADWGVDYLKYDNCNNEGRPAIERYTKM
GEAIKKTGRSMIYALCEWGENQPWLWGKTSGAQLWRTTGDISDNWSSMTGILDQQVGLEK
YSGPGGWNDPDMLEVGNGGMTDAEYRAHFALWSLMNAPLLAGNDVRSMPAATKQILANKD
IVALDQDWAGVQGHKVRDDGDTEVWTKPMSDGSAAVVLFNRGISAATMTSSAKDVGLSGR
DYRVRDLWTGAETESAGTLRATVPSHGAAVFRVWPAKFPAAAPAATLSLDTGSYFPAGKP
FTAQLRLTNDGSTPLAAARVTVSAPAGWQLDGRGDTLVPAVAPGKSWEKSVTVKPVKPGA
QVAMSVQASYYTGWGKRTLSANASGPVVTPFASGVTPMSKAPFLLTENGWGPVERGTSNG
ENQAGDGNPITINGQVYADGLGAHAPSLVRSYLGGGCQTFHAVVGLDDEFATGSVTFEVR
GDGKTLASTGVFRHGSPAQTLDVPLAGVQALDLVVTDGGDGNNTDHADWADAAVTC
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtcttgtgggtctgctggcggccgcctgcctgaccaccggcctggccaccgcc
ctcaccacgtccgtcgccgaagccgcgccggctccccgatcggcccagcaggcggccggt
gcgctgccgccgatgggctggaacagctggaacaagttcggctgcaacatcaacgaggag
ctcatccgcgagaccgccgacgcgatcgtctccagcggcctcaaggacgccggctaccag
tacgtgaacatcgacgactgctgggccgagcagaaccgcaacgccgagggcaagttcgag
cccaaccacgaacgcttcccgagcggcatcaaggcgctggccgactacgtgcacgccaag
ggcctcaagctcggcatctacaccagcgccggcacccagacctgcgcgaagaccatgccc
ggggcgctggaccacgaagacgtcgacgcgcagaccttcgccgactggggcgtcgactac
ctcaagtatgacaactgcaacaacgagggccgccccgccatcgagcgttacacgaagatg
ggcgaggccatcaagaaaaccggccgctcgatgatctacgcgctgtgcgagtggggcgag
aaccagccgtggctgtggggcaagacctccggcgcgcagctgtggcgcaccacgggcgac
atcagtgacaactggtcgagcatgaccggcatcctcgaccagcaggtgggcctcgagaag
tactccggccccggcggctggaacgaccccgacatgctcgaggtcggcaacggcggcatg
accgacgccgagtaccgcgcgcacttcgcgctctggtcgctgatgaacgcgccgctgctg
gcgggcaacgacgtgcgctcgatgccggccgcgacgaagcagatcctcgcgaacaaggac
atcgtcgcgctcgaccaggactgggcgggcgtgcagggccacaaggtccgcgacgacggc
gacaccgaggtgtggaccaagccgatgtccgacggttcggccgccgtggtgctgttcaac
cgcgggatctccgccgcgacgatgaccagcagcgcgaaggacgtcggcctgtccgggcgc
gactaccgcgtgcgcgacctgtggaccggcgccgaaaccgagagcgccggcacgctgcgc
gcgaccgtgccgagccacggcgccgcggtgttccgcgtgtggccggcgaagttcccggcc
gccgcgcccgcggccacgctgtcgctcgacacaggctcgtacttccccgcgggcaagccg
ttcacggcccagctgcgcctcaccaacgacggcagcaccccgctcgccgcggcccgcgtc
accgtgtcggcgccggcgggctggcagctcgacggacgtggtgacacgctcgtgccggcc
gtcgctccgggcaagtcctgggaaaagtcggtgacggtgaagcccgtgaagccgggcgcg
caggtcgcgatgtcggtgcaggcttcgtactacaccggctggggcaagcggacgctgtcg
gccaacgcgagcggaccggtcgtgaccccgttcgcgtcaggcgtcacgccgatgtcgaag
gcaccgttcctgctcaccgaaaacggctgggggccggtggaacgcgggaccagcaacggt
gagaaccaggccggtgacggcaacccgatcaccatcaacggccaggtttacgcggacggt
ctcggtgcgcacgcgccttcgctggtgcgctcctacctgggtggtgggtgtcagacgttc
cacgcggtggtcgggctcgatgacgagttcgccaccgggagcgtcaccttcgaggtgcgt
ggtgacgggaagacgctggcgtcgaccggggtcttccgccacggctctccggcgcagacg
ctggatgtgccgctggccggtgtgcaggcgctggacctcgtggtgaccgacggtggcgac
ggcaacaacaccgaccacgccgactgggccgacgcggcggtcacctgctga
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