Amycolatopsis rhabdoformis: VSH64_28870
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Entry
VSH64_28870 CDS
T09694
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00071
Fatty acid degradation
arhd00280
Valine, leucine and isoleucine degradation
arhd00310
Lysine degradation
arhd00362
Benzoate degradation
arhd00380
Tryptophan metabolism
arhd00410
beta-Alanine metabolism
arhd00640
Propanoate metabolism
arhd00650
Butanoate metabolism
arhd00907
Pinene, camphor and geraniol degradation
arhd00930
Caprolactam degradation
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01120
Microbial metabolism in diverse environments
arhd01200
Carbon metabolism
arhd01212
Fatty acid metabolism
Module
arhd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VSH64_28870
00650 Butanoate metabolism
VSH64_28870
09103 Lipid metabolism
00071 Fatty acid degradation
VSH64_28870
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VSH64_28870
00310 Lysine degradation
VSH64_28870
00380 Tryptophan metabolism
VSH64_28870
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VSH64_28870
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VSH64_28870
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VSH64_28870
00930 Caprolactam degradation
VSH64_28870
Enzymes [BR:
arhd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VSH64_28870
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VSH64_28870
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VSH64_28870
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
UDPG_MGDP_dh_N
NAD_binding_2
DAO
F420_oxidored
2-Hacid_dh_C
NAD_Gly3P_dh_N
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
WSE26883
LinkDB
All DBs
Position
complement(6294018..6296189)
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AA seq
723 aa
AA seq
DB search
MAESKTIRWEKDADGIVTLTLDDPNQSANTMNADFRESLGVTVERLEAEKDDIAGVVITS
AKKTFFAGGDLRDLIKATPEQAEAFTASSTLMKSQMRRIEQLGKPVVAAINGAALGGGLE
IALATHHRIAADAKGSQIGLPEVTLGLLPGGGGVVRTVRLLGIQSALLNVLLQGTRHKPR
KALELGLVHEVVDTVEELVPAAKAWIKANPEGGVQPWDVKGYKIPGGTPSNPSFAANLPA
FPANLRKQLKGAPMPAPRAILAAAIEGAQVDFDTAITVETRYFVSLATGQVSKNMTKAFF
FDLQSINSGGSRPDGFEKYTARKVGVLGAGMMGAAIAYVSAKAGIDVVLKDVSQEAADKG
KGYAVKLEEKALSRGKTTQEKSDELLGRIKATGDAADFEGVDFVIEAVFESVELKHKVFG
EIESIVNSDAVLGSNTSTLPITTLAEGVKRTEDFIGIHFFSPVDKMPLVEIICGEKTSPA
TLAKVFDYTLQIKKTPIVVNDSRGFFTSRVIGTFINEAVAALGEGVEPASIEQAGSQAGY
PAPPLQLMDELTLTLPRKIRVETRAAVEAAGGTWTPHASEAVIDRMLDDYDRKGRSTGAG
FYEYDENGKRTGLWPGLRDAFKSGTGEVPFEDLKERMLFAEALETVKCFDEGVLTTVADA
NIGSIFGIGFPAWTGGVIQYINQYAGGLQGFVDRSRELAARYGDHFLPPESLVAKAAKGE
IYE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagcaagaccatccgctgggagaaggacgcggacggcatcgtcacgctgacg
ctcgacgacccgaaccagtcggcgaacaccatgaacgccgacttccgcgagtcgctcggc
gtcaccgtggagcggttggaagccgagaaggacgacatcgcgggcgtggtgatcacgtcg
gccaagaagacgttcttcgccggcggcgacctgcgtgacctgatcaaggcgacgcccgag
caggccgaggcgttcaccgcgtcgagcacgctgatgaagtcgcagatgcgccgcatcgag
cagctcggcaagccggtcgtcgcggccatcaacggcgccgctttgggcggtggcctcgaa
atcgcgctggcgacgcaccaccgcatcgcggccgacgcgaagggcagccagatcggcctg
cccgaggtcacgctgggcctgctgcccggcggtggcggcgtggtgcgcaccgtgcggctg
ctcggcatccagagcgcgctgctcaacgtgctgctgcagggcacacggcacaagccgcgc
aaggcgctggagctgggcctggtccacgaggtcgtggacaccgtcgaggagctggtgccc
gccgccaaggcgtggatcaaggccaaccccgaaggcggtgtccagccgtgggacgtgaag
ggctacaagatcccgggcggcaccccgtcgaacccgagcttcgcggccaacctgcccgcg
ttcccggcgaacctgcgcaagcagctcaagggcgcgccgatgcccgcgccgcgcgcgatc
ctggccgcggccatcgagggcgcgcaggtcgacttcgacaccgcgatcacggtggagacg
cgctacttcgtgagcctggccaccggtcaggtctcgaagaacatgaccaaggcgttcttc
ttcgacctgcagtcgatcaactcgggtggctcgcgtccggacggtttcgagaagtacacc
gcccgcaaggtgggcgtgctcggcgccgggatgatgggcgcggcgatcgcgtacgtgtcg
gcgaaagccggcatcgacgtcgtgctcaaggacgtgtcgcaggaagccgccgacaagggc
aagggctacgcggtcaagctcgaggagaaggctctctcgcggggcaagaccacgcaggag
aagtccgacgagctgctcggccgcatcaaggccaccggcgacgcggccgacttcgagggc
gtcgacttcgtgatcgaggccgtgttcgagagcgtggagctcaagcacaaggtgttcggc
gagatcgagagcatcgtcaactccgacgccgtgctggggtccaacacctcgaccctgccg
atcaccacgctggccgagggcgtgaagcggaccgaggacttcatcgggatccacttcttc
tcgccggtggacaagatgccgctggtcgagatcatctgcggcgagaagacttcgcccgcg
acgctcgcgaaggtcttcgactacaccctgcagatcaagaagaccccgatcgtcgtcaac
gacagccgcggcttcttcacctcgcgcgtgatcggcacgttcatcaacgaggccgtcgcc
gcgctgggcgagggcgtcgagccggcgtcgatcgagcaggcgggttcgcaggccggctac
ccggcgccgccgctgcagctcatggacgagctgactttgacgctgccgcgcaagatccgc
gtcgagacccgcgccgccgtcgaggccgccggcggcacctggacgccgcacgcgtccgaa
gccgtcatcgaccgcatgctcgacgactacgaccgcaagggccgcagcaccggcgcgggc
ttctacgagtacgacgagaacggcaagcgcaccggcctctggcccggcctgcgcgacgcc
ttcaagtccggcaccggcgaagtccccttcgaggacctcaaggagcgcatgctcttcgcg
gaggcgctcgagacggtgaagtgcttcgacgagggcgtgctgaccacggtggcggacgcg
aacatcgggtcgatcttcgggatcgggttcccggcgtggactggtggggtcattcagtac
atcaaccagtacgcgggtgggttgcaggggttcgtcgaccggtcgcgtgagctggcggcg
cggtatggcgaccacttcctgccgccggagtcgttggtggctaaggctgccaagggtgag
atctacgaatag
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