Amycolatopsis rhabdoformis: VSH64_29610
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Entry
VSH64_29610 CDS
T09694
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arhd03400
]
VSH64_29610
DNA repair and recombination proteins [BR:
arhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VSH64_29610
Archaeal homologous recombinant proteins
VSH64_29610
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
EndA_linker
FBPase_2
Hormone_2
Motif
Other DBs
NCBI-ProteinID:
WSE27017
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Position
complement(6458040..6459194)
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AA seq
384 aa
AA seq
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MRLLHTSDWHVGRTFHGADLLAEQEAVLTHVAELVTSEQVDVVVVAGDIYDRAVPSAEAV
RVATKAMSRIRQAGAQLVITPGNHDSAARLGAFADFAAAGGLHLRATVGGLAEPVLLSDD
HGDVAIYGIPYLEPEPSRHALGVPEARGHTGVLTEAMRRVREDLAARPKTRSVVLAHAFV
TGAAASDSERTIAVGGVEQVPGDVFDGVDYVALGHLHGPQTLAEHLRYSGSPLAYSFSEA
RQRKSVWLVDLDAAGLAEVRRHELPVPRPLATLRGELPELLEAPEHEQWREHFLSVTVTD
RVRPVDAMRRLRERFPYAVHLDWEPEGGLAGAELKYADAVRGRTDIEIARSFLDDCRGAL
PTETEERLVFLALEAANRAAVAKL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgagactcctccacacctccgactggcacgtcgggcgcacgttccacggcgccgacctg
cttgccgagcaggaggccgtcctcacccacgtcgccgagctcgtgacgagcgagcaggtc
gacgtcgtggtggtggcaggcgacatctacgaccgcgcggtcccttcggccgaagcggtc
cgagtcgcgaccaaggccatgagccgcatccgccaggcgggcgcgcagctcgtgatcacc
cccggcaaccacgactccgccgcgcggctgggcgcgttcgcggacttcgcggcggccggt
ggtctgcacctgcgcgcgaccgtcgggggcctcgccgagcccgtgctgctgtccgacgac
cacggtgacgtcgcgatctacggcattccctacctcgaacccgagccgtcccgccacgcg
ctcggcgtgcccgaagcgcgcggccacaccggcgtgctcaccgaagccatgcgccgcgtg
cgcgaagacctggccgcacggccgaaaacgcgctccgtggtgctggcccacgcgttcgtc
accggtgccgcggccagcgactccgagcgcaccatcgcggtcggcggcgtggagcaggtg
ccgggtgacgttttcgacggcgtcgactacgtcgcgctcggccacctgcacggcccgcag
acgctcgccgagcacctccgctattcgggcagcccgctggcctactcgttttccgaggcg
cgccaacggaaatcggtttggctcgtcgacctcgacgcggccgggctcgccgaagtccgg
cgccacgagctgcccgtgccgagaccactggccacgctgcgcggcgagctgccggagctg
ctggaagcgccggaacacgagcagtggcgcgaacatttcctctcggtcaccgtgaccgat
cgcgtgcgcccggtcgacgccatgcgccgcctgcgtgagcggttcccgtacgcggtgcac
ctcgactgggaacccgaaggcggcctggccggcgcggagctgaagtacgccgacgccgtc
cgcggccgcaccgatatcgagatcgcccgcagcttcctcgacgactgccgcggcgcgctc
cccacggaaaccgaggaacggctggtgttcctcgctctcgaagcggccaaccgggcggcg
gtggcgaagctgtga
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