Amycolatopsis rhabdoformis: VSH64_29820
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Entry
VSH64_29820 CDS
T09694
Name
(GenBank) hypothetical protein
Organism
arhd
Amycolatopsis rhabdoformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endonuclea_NS_2
PPE
WXG100
Motif
Other DBs
NCBI-ProteinID:
WSE27054
LinkDB
All DBs
Position
6500873..6504889
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AA seq
1338 aa
AA seq
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MTEANPLVAQAKQDGDGPGPLTAGNGDYGYATGIGVAESAMDAFNGIKDGDWVSGGLGVL
SLAGEIAGAAIDPFGYLMSSVASFLMEHVQPLKDMLDSVAGNPPVIQSYADTWGNVAKAL
QDRQADYTNAVKTGTAEWTGDAADAYRKGAAECAEALGGAATVASAIGTVTMIMGQVVSF
VRETVRQLIADLVGKLISWVMEEVFSLGFGTPLVVAQAVTAISKWGEKISGLLTKLCDTM
RRVSPLLGKLADVFTKIIKILGKLAGKVTGLDVISTKNIKAGGFAHHTGGGGSGGGSHHS
GSDGDGDSPSGEGSDGPDGSDGSHSGDADADGTHSGDPDSGGSRSGDSTSGGSDSDSSHS
GDSTSGDSDSGSSHSRDGDTASSSPDGGSPSTRDGSSGDSSRRSTGNGTHDGDTGGAGGD
NSASTSSGDSPSVGSSTPRSTSGSSGGGSSSHADSAPSSPSHAGSSSPSGGGSSAPSHTG
DAPSAHTGDAPSPSHASNPPSGGSAPHSSGGSGGGAPAHSGGGTSAGSSPSSHQSAGDNS
TSASGYAPPKVDEPAPSAPAPRTGDGTGPSGSSTPNQPVAGGLPPQGGGAPAGSPSGGAP
GGTPAARPGSGGGWTGTPGSPGARTPEPSGPRAGGPDRGPSSRRPGEGPEPSGRRPDSGS
PRRPGDPNTRSPQGPDGSRRPGDPAAGGPRRPGDVPEPVARGGSPTATRPEADSPHRTPD
GKPADRTPRRGEPGDGAPHHSEPDDRAPRHNEPDDRAPHHDSDGSPEHHDPEHHENPEHH
DGHDNPDHHDTADHDGGPHHDSPDHGEPLTPDEVNQHHSESTPAGSSYHRGDTELGDLPH
RVQPDPDGRYTVDVHVTSDGHARIGDRHYTPEEFADVLRHNADYDGRPIRLIGCDAGSND
FANRLSRELDTDVMAPTKPAWTDSHGRVFSSDYEIGPDGRMRPRIPPDGEWSVHHPDGTS
HHAGQDGFAPESHHHDPSDVDADSAHARGDGDDVNGGVPEEEFAPPPATRTYNPDSPEFD
RRFVDWDRADDADFTGPRHREGHPDIDSPRDLDDVPARTSNTAPDPDGVPQTLHGERPLA
GNAEYHVTYQNGSSTRFYTDADGHVTHVEATPGTSTPNHNPDLRYPLIPGAQYRVPNFHD
PAKSWTFHIGENGKPDAMTGDPSFRGQDDTFRDVNSQNRSGGEGKEAFADHPEYGDKYEK
VRWAGGHLAANEMGGPGEYVNMHPQMAASNSGNYRDGWIHEASWRNQETALGKFANTEGQ
DIQHYQVAMHGDSNGVPESVTMRWQEVVYKTDSSGHVVLEDGKPVEISRVTKEREFPNNP
ADINFGKNRQYSDRSRAR
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggcgaacccgctcgtcgcgcaggcgaagcaggacggcgacggcccaggtccg
ctcacggcgggcaacggcgactacggctacgccacgggtatcggcgtcgccgagtcggcg
atggacgcgttcaacggcatcaaggacggcgactgggtctccggcggcctgggcgtgctg
agcctcgcgggcgagatcgcgggcgcggcgatcgacccgttcgggtacctgatgtcgtcg
gtggcgtcgttcctgatggagcacgtgcagccgctgaaggacatgctcgactcggtggcc
ggcaacccgccggtgatccagtcctatgcggacacctggggcaacgtcgcgaaggcgttg
caggaccggcaggccgattacaccaacgcggtgaagaccggcaccgccgaatggacgggc
gacgcggccgacgcgtaccgcaagggtgccgcggagtgcgcggaggccctcggcggcgcc
gcgacggtggccagtgccatcggcacggtcacgatgatcatgggccaggtcgtgtcgttc
gtgcgggagaccgtgcggcagctgatcgccgacctggtgggcaagctgatctcgtgggtg
atggaggaggtcttctccctcggcttcggtacgccgctggtggtcgcgcaggccgtcacg
gcgatctccaagtggggcgagaagatcagcggcctgctcacgaagctgtgcgacacgatg
cgccgggtgtcgccgctgctgggcaagctggccgacgtgttcacgaagatcatcaagatc
ctcggcaagctggccggcaaggtcaccggcctcgacgtgatcagcaccaagaacatcaag
gcgggtgggttcgcgcaccacacgggtggtggcgggtccggcggtggttcgcaccacagt
gggtccgacggtgacggggattcgcccagcggtgagggttcggacggtccggacggctcg
gacggttcgcattcaggtgatgcggacgccgacggtacccactccggtgatccggactcc
ggcggctcgcggtccggtgactcgacttccggtggctcggattccgacagctcgcactcc
ggtgactcgacttccggcgactcggattccggcagctcgcactcccgtgacggcgacacg
gcgtcgtcgagcccggacggcggcagtccctccacaagggacggttcgtccggtgactcg
tcgcgccgcagtacgggcaacggaacccacgacggcgacacaggcggggccggcggggac
aactcggcgtcgacgtccagtggcgattccccctccgtcggcagctccacgccgcgcagc
accagcgggtcctccggcggcgggtcgtcgagtcatgccgattccgcaccgagctcgccg
agccacgcgggcagctcttcgccgtccggtggtggcagctccgcgccgtcgcacaccggc
gacgcgccgagtgcccacaccggtgacgcgccgagtccgtcgcacgcgagcaacccgccg
tcgggtggctccgcgccccacagcagcggcgggtccggcggcggcgcaccggcccactcc
ggcggcggcacgtccgccggtagttcgccgtcttcgcaccagagcgcgggagacaactca
acctcggcttcgggctacgcgccgccgaaggtcgacgagcccgcgcccagcgcgcccgcg
ccgcgcaccggcgatggcacgggcccctcgggctccagcacgccgaaccagcctgtcgcc
ggtggtttgccgccgcagggtggtggcgctccggcaggttcgccgtcgggcggcgcgccc
ggcggcaccccggcggcccggcccggcagcggtggtggctggaccggcacgccaggcagc
cccggcgcacgcactccggagccctcgggacctcgcgccggtggccccgatcgcgggccc
tcgtctcgacggcccggtgagggtccggagccgtcaggccggcgccctgattcgggttcg
ccgcgccgcccgggtgacccgaacacgcgctcaccccaaggccccgacggttcgcgccgc
cccggcgacccggccgcgggcgggccgcggcggccgggtgacgtgccggaacccgtcgcg
cgcggtggttcgccgacggcgacccgcccggaagccgacagtccacatcggactcccgac
ggcaaaccggccgaccggacgccgcgccgcggcgagccgggcgacggcgcgccgcaccac
agcgagcccgacgaccgcgctccccgccacaacgaacccgacgaccgcgctccgcaccac
gacagcgacggctcacccgagcaccacgaccccgagcaccacgaaaatccggagcaccac
gacggtcacgacaaccctgaccaccacgacaccgccgaccacgacggcggcccgcaccac
gactcacccgaccacggcgagccgctgacaccggacgaggtcaaccagcaccactccgaa
agcacgcccgccggcagctcctaccaccgcggcgacacggagctgggcgacctcccgcac
cgcgtccagccggatccggacgggcgctacaccgtcgatgtgcacgtgacgtccgacggt
cacgcgcgcatcggcgaccggcactacacgccggaggagttcgccgacgtgctgcgccac
aacgcggactacgacggcaggcccatccggctgatcggctgcgacgcgggctccaatgac
ttcgccaaccggctgtcgcgcgagctcgacaccgacgtgatggcgccgacgaaaccggcc
tggaccgactcacacggccgggtgttctcgtcggactacgagatcggcccggacgggcgg
atgcggccgcggatcccgccggacggcgagtggtccgtgcaccatccggacggcacgtcg
caccacgcgggtcaggacgggttcgcgccggagtcgcaccaccacgacccgagcgacgtc
gacgcggacagcgcccacgcgcgcggtgacggtgacgacgtaaacggcggtgtcccggag
gaggagttcgcgccgcctccggccacgcgcacgtacaaccccgactcgccggagttcgac
cggcggttcgtggactgggaccgcgccgacgacgccgatttcaccgggccgcgccaccgc
gagggccacccggacatcgactcgccgcgggacctcgacgacgtacccgcccgcacgagc
aacaccgcgcccgacccggacggcgtgccgcagaccttgcacggggaacgtccgctggcc
ggcaacgccgagtaccacgtgacgtaccagaacggctccagcacgcggttctacaccgac
gccgacggccacgtcacgcacgtggaggccacacccggcacgtccacgcccaaccacaac
cccgacctgcgctacccgctcatccccggcgcgcagtaccgcgtgccgaacttccacgac
ccggcgaagtcgtggacgttccacatcggcgagaacggcaagcccgacgccatgacgggc
gacccgagtttccgcgggcaggacgacaccttccgcgacgtcaactcgcagaaccgctcc
ggcggcgagggcaaggaggcgttcgccgaccaccccgaatacggtgacaagtacgagaag
gtgcgctgggccggcggccacctcgcggccaacgagatgggcggcccgggtgagtacgtg
aacatgcacccgcagatggcggcgtccaacagcggcaactaccgcgacgggtggatccac
gaagcgtcgtggcgcaaccaggagacggcactgggcaagttcgccaacacggagggccag
gacatccagcactaccaggtcgccatgcacggcgacagcaacggtgtaccggagagcgtc
accatgcgctggcaggaagtcgtgtacaagacggactcgagcgggcacgtcgtgttggag
gacgggaaacccgtggagatctcgcgggtgaccaaggaacgcgagttcccgaacaacccc
gcggacatcaacttcggaaagaacaggcagtacagtgaccgatcccgcgcccgctga
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