Amycolatopsis rhabdoformis: VSH64_29990
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Entry
VSH64_29990 CDS
T09694
Name
(GenBank) Hsp70 family protein
KO
K04043
molecular chaperone DnaK
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VSH64_29990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arhd03019
]
VSH64_29990
03110 Chaperones and folding catalysts [BR:
arhd03110
]
VSH64_29990
03029 Mitochondrial biogenesis [BR:
arhd03029
]
VSH64_29990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arhd04147
]
VSH64_29990
Messenger RNA biogenesis [BR:
arhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VSH64_29990
Chaperones and folding catalysts [BR:
arhd03110
]
Heat shock proteins
HSP70 / DNAK
VSH64_29990
Mitochondrial biogenesis [BR:
arhd03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
VSH64_29990
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
VSH64_29990
Exosome [BR:
arhd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VSH64_29990
Exosomal proteins of breast cancer cells
VSH64_29990
Exosomal proteins of colorectal cancer cells
VSH64_29990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Uds1
NNH6
CYP38_PsbQ-like
Motif
Other DBs
NCBI-ProteinID:
WSE27085
UniProt:
A0ABZ1I0C9
LinkDB
All DBs
Position
complement(6549678..6552170)
Genome browser
AA seq
830 aa
AA seq
DB search
MRDTIDFGIDLGTTNSALAVLDGGQVSVVKNNLQGDYTPSAVWLPKAGVVQVGAAAKSRR
ERDPDNVQIEFKQAMGYVDARRTFARAGVSMTPVELSAEVLKSLRGDAARRFGEPPEAAV
ITVPAAFALNQTEATSEAAKLAGFSSRCPLVQEPTAAAFAYGFQNESRGAYWMVFDFGGG
TFDSAVVSTVEGELSVLHHAGDTGLGGKNIDAAIVSSLLGPAAAKEFGLTNLAADDPRMV
RITAVLRAAAESAKIALSSTEQAQIMTELDLGGGAPETFEYTLQRADVDRLAMPFYLRAV
HLCREALANANLRPSDIDRLLLVGGPTLAPGLRELLADPSDGLGIELDHSQDPSTVVARG
AAIYAGTVALPRAKVVPKRGEFSGVLSYPVTTSLTTVPVSGRFETPGGADWSRFRVALSD
SRRQPAYRSAEVALTAGGAFTLDVLLQERQANRFDVELIDPAGAHVPVNPAGFTTTHVVN
EMQGQAVVNSMGLTEADGTFTPMLMKNRPLPAQATQSFFTTASVHRTDSGSVIRIPIAEG
EFRRGERNKQVGLIEIKAQDVRRDLPRGSEVVVTFEMDQSRLVSIIADVPLLGEQFDAEV
DLSHTPVPDVPALRRQLNELEARHEQLRSEIETTRSDRARGLLARLDEKGTVAAVRAEVT
SSTNDEGAAVAADERIRSVQAELDDIEEELRIPDVMARLRDQIEHCRELVESVGSAEDRT
ELADIERRYETVRDTRDVAAAERLSDRATDLQVLLLRRDGRLDEEIFHALRMSQDRMTDP
ARARELVREGDHALNSRNWPALNDVNRRLRALLPPDQQGSGFDGIQRGEK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacaccattgatttcggcatcgacctcggcacgacgaacagcgcgctcgccgtg
ctggacggcggccaggtctcggtggtcaagaacaacctgcagggcgactacacgccgtcg
gccgtgtggctgcccaaggccggtgtcgtgcaggtcggcgccgcggcgaaatcccgccgc
gaacgcgacccggacaacgtccagatcgagttcaagcaggccatgggctacgtggacgca
cggcgcacctttgcccgggccggggtgtcgatgacgccggtcgaactgtcggccgaggtg
ctcaagtcgcttcgcggcgacgcggcccggcggttcggcgagccgcccgaggcggcggtg
atcaccgtgccggccgcgttcgcactcaaccagacggaggcgaccagcgaagcggcgaag
ctcgccggcttctcctctcggtgcccactggtgcaagagccgacggcggccgccttcgcc
tacggcttccagaacgagagccgcggcgcctactggatggtgttcgacttcggcggcggc
acgttcgactcggccgtggtcagcacggtcgaaggcgaattgtcggtgctgcaccacgcg
ggtgacaccgggctcggcggcaagaacatcgacgcagccatcgtgagcagcctgctcggc
cctgccgcggcgaaggagttcgggctcacgaacctcgccgccgacgatccgcgcatggtc
cggatcaccgcggtgctccgcgcggccgcggagtcggccaagatcgcgctgtcctcgacg
gagcaggcgcagatcatgaccgagttggacctcggcggtggggcccccgagacgttcgag
tacacccttcagcgcgcggacgtcgaccgcctcgccatgccgttctacctgcgcgcggtg
cacctgtgccgcgaggcgctggccaacgcgaacctgcggccgtccgacatcgaccggctc
ctgctcgtcggcggccccacgctggcaccgggcctgcgtgagctgctcgccgacccgagc
gacggcctcggcatcgaactcgaccacagccaggacccgagcacggtcgtcgcgcgcggc
gccgccatttacgccggcacggtcgccctgccccgcgccaaggtcgtgccgaagcgcggc
gagttctccggagtgctgtcctacccggtcaccaccagcctcaccaccgtcccggtctcc
ggccgcttcgagaccccgggcggcgccgactggagccgcttccgcgtggcgctgagcgat
tcgcgccggcagccggcctaccgcagcgcggaggtcgcgctgaccgccggcggcgcgttc
acgctcgacgtgctgctgcaggagcggcaggcgaaccggttcgacgtcgagctgatcgac
cccgcgggcgcccacgtgccggtgaacccggcgggcttcacgaccacgcacgtggtgaac
gagatgcagggccaggccgtggtcaacagcatggggctgaccgaggccgatggcacgttc
acgccgatgctgatgaagaaccgcccgctgcccgcgcaggccacgcagtcgttcttcacc
accgcgagcgtgcaccgcaccgactcgggctcggtgatccgcatcccgatcgccgaaggc
gagttccgccgcggggagcgcaacaagcaggtggggctcatcgagatcaaggcccaggac
gtgcgccgggacctgccgcgcggcagtgaggtggtggtgaccttcgagatggaccagtcg
cggctcgtgtcgatcatcgccgacgtgccgctgctcggtgagcagttcgacgccgaggtg
gacctgagccacaccccggtgccggacgtgccggccctgcgccgccagctcaacgagctc
gaagcccgccacgagcagctgcgctcggagatcgagaccacgcggtcggaccgggcgcgc
gggctgctggcgcggctcgacgagaagggcacggtcgcggcggtgcgcgccgaggtcacc
tccagtaccaacgacgagggtgcggccgtggccgccgacgagcggatccggtcggtgcag
gccgagctcgacgacatcgaggaggaactgcgcatcccggacgtgatggcccggctgcgc
gaccagatcgagcactgccgcgagctcgtggagagcgtcggctcggccgaggaccgcacc
gagctggccgacatcgaacgccgctacgagaccgtgcgcgacacgcgtgacgtcgcggcc
gccgaacgcctctccgatcgcgccaccgacctgcaggtgctgctgctgcgccgcgacggc
cggctcgacgaggagatcttccacgccctgcgcatgtcgcaggaccggatgaccgatccg
gcacgcgctcgtgagctggtccgcgaaggcgaccacgcgttgaactcgcgcaactggccg
gcgctcaacgacgtgaaccgccgcctgcgcgccctgctgccgcccgatcagcagggcagc
ggcttcgacggcatccagcgcggggagaagtga
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