Amycolatopsis rhabdoformis: VSH64_32110
Help
Entry
VSH64_32110 CDS
T09694
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arhd03400
]
VSH64_32110
Enzymes [BR:
arhd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VSH64_32110
DNA repair and recombination proteins [BR:
arhd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VSH64_32110
Prokaryotic type
VSH64_32110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
WSE27485
LinkDB
All DBs
Position
complement(6974846..6976186)
Genome browser
AA seq
446 aa
AA seq
DB search
MTSVLWFRRDLRLGDHAALLAAAEAEGPVLALYVLDEKLLKPSGAPRRAFLFDSLRALDE
QLDGRLLVVHGDPVQEVLRVARSAEATAVHVSADTGPYGRWRDEKVAKSLARHDIDFVAT
GSPYAVQPGRVTKPDGDPYRVFTPFRRAWAEHGWRRPADTGVSLVDWVKPGKSAKIPKSP
ALGDTQLPEAGEAAALEGWHDFLETGLSRYATDRDRPDRPGTTRMSTYLHWGAIHPRTML
SDLAGKSGDGVQALRSELCWREFHADVLWHRPETARKNYDRRFDKMKHDEDVEVFEAWCA
GRTGYPIVDAGMRQLLAEGWMHNRIRMVVASFLVKDLHLPWWWGARHFMRHLVDGDLASN
QLNWQWVAGSGTDAAPYFRIFNPTTQGEKFDPDGEYVRRYVPELREVAGKAVHKLKERPE
KYAAPLVDHAEERQVALERFGAIKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgtgttgtggttccggcgggacctgcgcctcggtgaccacgcggccctgctg
gccgccgccgaggccgagggtcccgtgctggcgttgtacgtgctcgacgagaagctgctg
aagccttcgggcgcgccgcggcgggccttcctgttcgacagccttcgggcgctggacgaa
caactcgacggccggttgctggtggtgcacggcgacccggtgcaggaagtcctgcgggtc
gcgcgatccgccgaggcgacggctgtgcacgtgagcgccgatactgggccgtacggccgg
tggcgcgatgagaaggtcgcgaaatccttggcccgccacgacatcgacttcgtggccaca
ggctcgccgtacgcggtgcagccggggcgggtgaccaaaccggacggtgatccgtaccgg
gtgttcacgccgttccgccgcgcgtgggccgagcacggctggcggcgcccggccgacacc
ggcgtgtcccttgtggactgggtgaagccggggaagtccgcgaagatcccgaaatcaccg
gcgctcggcgacacgcagctacccgaagcgggtgaggccgcggcgctcgaaggctggcac
gacttcctcgagaccgggctttcgcgctacgccaccgatcgtgatcggccggaccgtccc
ggcaccacgcgcatgtcgacctacctgcactggggcgccatccacccgcgcacgatgctt
tcggacctcgccgggaagtccggtgacggggtgcaggcgctgcggtcggagctgtgctgg
cgcgagttccacgccgatgtgctgtggcaccggccggaaaccgcgcggaagaactacgac
cgccggttcgacaagatgaaacacgacgaagacgtcgaggtgttcgaagcctggtgcgcc
ggccgcaccggttatccgatcgtggacgccgggatgcgccagctgctcgccgaaggctgg
atgcacaaccggatccgcatggtggtggcgagtttcctggtgaaggacctgcacctgccg
tggtggtggggcgcgcggcacttcatgcgccacctcgtggacggcgatctggcgtccaac
cagctcaactggcagtgggtggcgggcagcggcacggacgcggcgccgtacttccggatc
ttcaacccgaccacccagggcgagaagttcgatccggacggcgagtacgtgcgccggtac
gtgccggaacttcgtgaggtggccgggaaagctgtgcacaagctgaaggagcggccggag
aagtacgcggcgccgttggtggaccacgccgaggagcggcaggtggcgctggagcggttc
ggggcgatcaagcagtcttga
DBGET
integrated database retrieval system
