Amycolatopsis rhabdoformis: VSH64_32630
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Entry
VSH64_32630 CDS
T09694
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VSH64_32630 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arhd03019
]
VSH64_32630 (groL)
03110 Chaperones and folding catalysts [BR:
arhd03110
]
VSH64_32630 (groL)
03029 Mitochondrial biogenesis [BR:
arhd03029
]
VSH64_32630 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arhd04147
]
VSH64_32630 (groL)
Enzymes [BR:
arhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VSH64_32630 (groL)
Messenger RNA biogenesis [BR:
arhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VSH64_32630 (groL)
Chaperones and folding catalysts [BR:
arhd03110
]
Heat shock proteins
HSP60 / Chaperonin
VSH64_32630 (groL)
Mitochondrial biogenesis [BR:
arhd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VSH64_32630 (groL)
Exosome [BR:
arhd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VSH64_32630 (groL)
Exosomal proteins of other body fluids (saliva and urine)
VSH64_32630 (groL)
Exosomal proteins of breast cancer cells
VSH64_32630 (groL)
Exosomal proteins of colorectal cancer cells
VSH64_32630 (groL)
Exosomal proteins of bladder cancer cells
VSH64_32630 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
WSE27574
LinkDB
All DBs
Position
complement(7087850..7089478)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKLIAFDEDARRGLERGLNTLAEAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
AAVEAITEQLHKMAVQIETKEQIAATASISAADRTIGELIAEALDKVGKEGVVTVEESNT
FGLELELTEGMRFDKGYVSGYFVTDPERQEAELEDPYILLFGSKISNVKDVLPLLEKVIQ
SGKPLLIIAEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAILQDIAILSGGQVIS
EDVGLKLENADLSLLGRARKAVITRDETTIVEGAGDADQIQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
AEAAFAGLKLEGDEATGANIVKVAVEAPLKQIAINAGLEGGVVAEKVKSLPQGHGLNAAT
GVYEDLLAAGVPDPTKVTRSALQNAASIAALFLTTEAVVADKPEKASAAPADPSGGMGGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactgatcgcgttcgacgaggacgcccgccgcggtctcgagcgcggcctcaac
accctcgccgaagccgtcaaggtgaccctcggcccgcgtggccgcaacgtcgtgctcgaa
aagaagtggggcgcgccgacgatcaccaacgacggtgtctccatcgccaaggagatcgag
ctcgaggacccgtgggagaagatcggggccgagctcgtcaaggaagttgccaagaagacc
gacgacgtcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctcgtgcgc
gagggtctgcgcaacgtcgccgcgggtgccgacccgatcagcctgaagcgcggcatcgag
gcggccgtcgaggccatcaccgagcagctgcacaagatggccgtccagatcgagaccaag
gagcagatcgctgctaccgcctcgatctcggccgctgaccgcaccatcggcgagctgatc
gccgaggcgctggacaaggtcggcaaggaaggcgtcgtcaccgtcgaggagagcaacacc
ttcggtctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacgtgtcgggt
tacttcgtgaccgacccggagcgccaggaagccgagctggaggacccctacatcctcctc
ttcggttccaagatctcgaacgtcaaggacgttctgccgctgctggagaaggtcatccag
tccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaagccctggccaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgcaaggccatcctgcaggacatcgcgatcctgtccggtggccaggtgatctcg
gaggacgtcggcctcaagctggagaacgcggacctgtcgctgctgggccgcgcccgcaag
gccgtgatcacgcgcgacgagaccacgatcgtcgagggtgcgggcgacgccgaccagatc
cagggtcgcgtcaaccagatccgcgcggagatcgagaactcggactccgactacgaccgt
gagaagctgcaggagcgcctcgcgaagctggccggcggcgtcgccgtcatcaaggccggt
gccgcgacggaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggccgccgtggaagagggcatcgtcgccggtggtggcgtggctctgatccaggcc
gccgaggctgccttcgcgggcctgaagctcgagggcgacgaggccactggtgccaacatc
gtcaaggtcgccgtcgaggcgccgctgaagcagatcgccatcaacgccggcctcgagggc
ggcgtcgtggcggagaaggtcaagtccctcccgcagggtcacggcctcaacgctgccacc
ggtgtctacgaggacctgctcgccgccggcgtgccggaccccacgaaggtcacccgctcc
gcgctccagaacgccgcctccatcgcggcgctgttcctgaccaccgaggctgtcgtggcg
gacaagccggagaaggcttccgccgctccggccgacccgtccggtggcatgggcggcatg
gacttctga
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