Amycolatopsis rhabdoformis: VSH64_33455
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Entry
VSH64_33455 CDS
T09694
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VSH64_33455 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
arhd01007
]
VSH64_33455 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arhd03016
]
VSH64_33455 (lysS)
Enzymes [BR:
arhd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
VSH64_33455 (lysS)
Amino acid related enzymes [BR:
arhd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VSH64_33455 (lysS)
Transfer RNA biogenesis [BR:
arhd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VSH64_33455 (lysS)
Prokaryotic type
Other AARSs
VSH64_33455 (lysS)
BRITE hierarchy
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Ortholog
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Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WSE35292
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All DBs
Position
complement(7260016..7261524)
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AA seq
502 aa
AA seq
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MTEFPAPDALPEDDLPEQMRVRRDKRDRIIAEGIDPYPVEVPRTHSLAEIRAAHTDLEPD
TATGQTVGVTGRVMFLRNTGKLCFATLREGDGTELQAMLSLAKVGDQSLAAWKSDVDLGD
HVFVAGEVITSKRGELSVMADKWQLTSKALRPLPNTHKELAEETRIRQRYVDLILRDRAR
DVVRTRAGVVRSLRESFHRRGFTEVETPMLQTLHGGAAARPFVTHSNAFDLELFLRIAPE
LYLKRCVVGGIEKVFEINRNFRNEGSDSSHSPEFAMLEYYEAYATYDTNAVMTRELIQEA
AENVLGTQVVTLVDGSEYDLSGEWTTLGMYESLSEALGEEVSPETPAERLHKIAEAREIE
VDPKLGHGKLVEELWEHLVGDDLTAPTFVRDFPLETSPLTRQHRSRAGVAEKWDLYVRGF
ELATGYSELVDPVVERQRLTEQSLLAAQGDSEAMRLDEDFLRALEYGMPPSGGVGMGVDR
LLMALTGLGIRETILFPLVRPE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgacggaattccccgcgcccgacgcgctgcccgaagacgacctgcccgaacagatgcgg
gtgcgccgggacaagcgcgaccggataatcgcggagggtatcgatccttaccccgtcgag
gttccccgcacgcactcgctcgccgagatccgcgcggcccacacagatctcgaacccgac
accgccactggtcagacggtcggcgtcaccggccgggtgatgtttctgcgcaatacgggc
aaactgtgtttcgccactcttcgtgagggcgacggcacggaactgcaggcgatgctcagc
ctcgcgaaggtcggcgaccagtcactcgccgcgtggaagagtgacgtcgatctcggtgac
cacgtattcgtcgccggtgaggtgatcacttccaagcgcggagagctttccgtgatggcc
gacaagtggcagctcacgtcgaaggcgctgcggccgctgccgaacacccacaaggagctg
gccgaggaaacgcgaatccggcagcgttatgtcgacttgattctgcgcgatcgggcgcgc
gatgtggtgcgcacccgcgccggcgtggtgcggtcgctgcgcgagtcgttccaccgccgc
ggattcaccgaggtcgagacgccgatgctgcagacgctgcacggcggcgccgcggccagg
ccattcgtcacgcattcgaatgcgttcgacctcgagctgttcctgcgcatcgcgccggag
ctctacctcaagcgctgtgtggtcggcgggatcgagaaggttttcgagatcaaccgcaac
ttccgcaacgagggcagcgactcctcgcactcgcccgagttcgcgatgctggagtactac
gaggcctacgccacgtacgacacgaatgccgtgatgacccgcgaactcatccaagaggcc
gcggagaacgtgctcggcacccaggtcgtcaccctcgtcgacggatcggagtacgacctt
tccggcgaatggacgacgctcggcatgtacgagtcgctgtcggaggcattgggtgaagaa
gtgtcacccgagactcccgccgagcggttgcacaagatcgccgaggcgcgcgagatcgag
gtggaccccaagctcggccacggcaaactggtcgaagaactgtgggaacacctcgtgggc
gacgatctcaccgcgcccacatttgtgcgtgattttccgctcgagacatccccgctgacc
aggcagcaccgcagccgggccggggttgccgagaagtgggacctctacgtgcgcggattc
gaactcgccaccggttactccgagctggtggatccggtcgtggagcggcagcggctcacc
gaacagtccctcctcgcggcacagggtgatagcgaggccatgcgcctcgacgaggatttc
cttcgggccctggagtacggaatgccgccgagcggtggtgtcggaatgggagtcgaccgg
ctgctcatggcgctgaccggtctcggtatccgggagacgatcctcttccccctcgtgcgg
cctgaataa
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