Amycolatopsis rhabdoformis: VSH64_33695
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Entry
VSH64_33695 CDS
T09694
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
VSH64_33695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
WHD_HRQ1
Helicase_C
ResIII
LRR_RPS2
Ribonuc_2-5A
Motif
Other DBs
NCBI-ProteinID:
WSE27774
LinkDB
All DBs
Position
7314061..7317093
Genome browser
AA seq
1010 aa
AA seq
DB search
MVERGRRLLSRVTAGVPVNENPVTHVAELPARAAGFAAWPEWAAPEVVSAFAGAGVGVAW
KHQVEAASLAHAGSHVVVSTGTASGKSLAYQLPVLSSLATGSSATALYLSPTKALGADQL
RSVSSLDVPSVRAASYDGDTPMTERDWVRAHANWVFTNPDMLHRGILSAHSRWTRFFKNL
AYVVVDECHSYRGVFGSHVALLLRRLRRVAAHYGASPVFVLASATTASPAEFASRLTGLS
CAAVTEDASPRGARTVALWEPPLLDELTGENGAPVRRSAGVETARILTDLVVEGARSLAF
VRSRRGAELTALGARRLLSEVDPALVETVAAYRSGFLPEERRALEAALLSGRLLGVATTN
ALELGVDIAGLDAVVLAGYPGTLASFWQQAGRAGRSGDEALVVFVARDDPLDTYLVHHPA
ALLERPVETAVLDPTNPYVLGPQLACAVAELPLTEPELPMFGGEAARSVLADLAEEKLLR
RRSSGWYWTSRDRPHAEVGIRGSGGDQIAVVEADSGRMLGTVDPGSACYAVHPGAVYLHQ
GSSYVVDELDLETGLALVHAEDPDWHTSPREIVDISVLSTQEQCRHGGVTVSLGEVAVTS
QVVGYLRRRPSGEVLDHTPLDLPEQSLHTRAVWYTVSSDLLGPNFRSVTGRGFGPADAVA
AAGTDSVASVGTGGGGGSGAEATAGSVAPAGTEGAKGDSAEEPTGTVAPVGTEGTRVGAE
GLESVGTGGAGGDGAEEPTGTVAPVGTEGARVGIESVESVGTGGAEGGGAEATAGSVAPA
GTEGARIEIENLAAAGTGGAKGDSAAESVGTVAPVGTGGTRVGAEGLESVGTGGAGGDGD
AEVAETVAPVGTGGARVGAEVGAPVGTGGARRAPGGAGLSPARVPGALHAAEHAAIGLLP
LFATCDRWDIGGVSTAWHEDTGEATVFVHDGHPGGAGFADRGYAAIVPWLAATREAIVSC
ECPTGCPSCVQSPKCGNGNEPLDKAGAVAVLDTVLGALRQHGEQCGHGGA
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
gtggttgagcgaggacggaggctgctgagccgggtcacggccggggtcccggtgaacgag
aacccggtcacgcacgtggccgagcttcccgcgcgtgcggcgggtttcgcggcgtggccg
gagtgggccgcgccggaagtcgtgtccgcgttcgcgggcgcgggtgtcggtgtggcctgg
aaacaccaggtcgaggcggcgtcgttggcgcacgcgggttcccacgtggtggtgtccacg
ggcacggcgtcgggaaagtcgctggcctaccagctgccggtgctgtcgtcgctggccacg
gggtcgagcgccaccgcgctgtacctctcgcccaccaaggcgctgggcgccgaccagctg
cgttcggtgtcctctttggacgtcccttcggtgcgcgcggcttcgtacgacggcgacacc
ccgatgaccgagcgcgactgggtgcgcgcgcacgccaactgggtgttcacgaacccggac
atgctccaccgcggcatcctgtcggcgcattcgcggtggacccggtttttcaagaacctg
gcgtacgtggtggtcgacgagtgccacagctaccgaggggtgttcggttcgcacgtggcg
ctgctgctgcgtcggctgcgtcgggtcgcggcgcactacggggcttcgccggtgttcgtg
ctggcgtcggcgaccacggcttcgcccgcggagttcgcttcgcggctcacggggctgtcg
tgcgcggcggtcaccgaagacgcttcgccgcggggcgcgcgcacggtcgcgctgtgggag
ccgccgctgctcgacgagctgacgggtgaaaacggcgcgccggtgcgccggtcggccggc
gtcgagaccgcgcggatcctcacggatctggtcgtggagggcgcgcgttcgctggcgttc
gtgcgctcgcggcgcggggccgagctcacggcgctgggcgcgcggcggctgttgtccgaa
gtggacccggcgctggtggaaaccgttgcggcgtaccgttccggcttccttccggaggaa
cggcgggcgctggaggcggcgttgctgtccggccgcctgctcggcgtggccacgaccaac
gcgctcgagctcggcgtcgacatcgcgggcctcgacgcggtggtgctggccggttacccg
ggcacgctggcgtcgttctggcagcaggccgggcgcgcgggccgctcgggcgacgaggcg
ctggtggtgttcgtggctcgcgacgatcctctcgacacgtatctggtgcaccatccggcg
gcgttgctggagcgcccggtggagacggccgttttggacccgacgaacccgtatgtgctc
ggcccgcagctcgcgtgcgccgttgcggagctgccgctcaccgaaccggaactccccatg
ttcggcggcgaggcggcgcggtcggtcctggcggacctcgccgaggagaagctgctgcgc
cgccgctccagcggctggtactggacctcccgcgaccgcccccacgccgaagtcggcatc
cgcggctcgggcggcgaccagatcgccgtcgtcgaagccgactccggccgcatgctcggc
acggtggaccccgggtccgcttgttatgccgtgcaccccggcgcggtttatctgcaccag
gggtcgtcgtacgtcgtggatgagctcgacctggaaaccgggctcgcgctggtgcacgcg
gaagacccggactggcacacgtccccgcgtgagatcgtggacatttccgtgctgagcacc
caggaacagtgccgccacggcggcgtcacggtgtccctcggcgaggtggcggtgacgtca
caggtcgtcggctacctccgccggcggccctcgggtgaggtgctggatcacacgccgttg
gacctgccggaacagagcctgcacacgcgggctgtttggtacacggtgagcagcgatttg
ctcggcccgaacttccggtcggtgactggccgaggtttcggcccggcggatgctgttgct
gccgccggaacggacagcgtggcatcggtgggaaccgggggtggtgggggttctggcgcc
gaggcgacggctgggtccgtcgcaccggcagggaccgaaggcgccaagggcgacagcgcc
gaggagccgaccgggaccgtcgcaccggtggggaccgaaggcactcgggtcggggccgag
ggtctggagtcggtggggaccgggggtgctgggggcgacggcgccgaggagccgaccggg
accgtcgcaccggtggggaccgaaggcgctcgggtcgggatcgagagcgtggaatcggtg
gggaccggaggtgctgagggcggcggcgccgaggcgacggctgggtccgtcgcaccggca
gggaccgaaggcgcgcggatcgagatcgaaaacttggcagcggcggggaccggaggtgcc
aagggcgacagtgccgcggaatcggtcgggaccgtcgcgccggtggggaccggaggcact
cgggtcggggccgagggtctggagtcggtggggaccgggggtgctgggggcgacggtgac
gcggaggtggccgaaaccgtcgcgccggtggggaccgggggcgctcgggtcggggccgag
gttggggcgccggtggggaccgggggtgctcgcagagcaccggggggcgccggattgagt
ccggcgcgcgtccccggtgccctgcatgccgccgagcacgcggcgatcggcctgctaccg
ctgttcgctacgtgcgaccgctgggacatcggcggggtgtctaccgcgtggcacgaggac
accggggaggcgacggtgttcgtgcacgatgggcatcccgggggtgcgggatttgccgac
cgcggttatgccgcgattgtcccgtggctggccgcaacgcgggaggcgatcgtctcctgc
gagtgcccgacgggctgcccgtcctgtgttcagtcgccgaagtgcgggaacggcaacgaa
ccgctggacaaggcaggggcggtggccgtactggataccgtgcttggggcgttgcgtcag
cacggggagcagtgcggccacggtggtgcgtga
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