Amycolatopsis rhabdoformis: VSH64_34020
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Entry
VSH64_34020 CDS
T09694
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00250
Alanine, aspartate and glutamate metabolism
arhd00410
beta-Alanine metabolism
arhd00430
Taurine and hypotaurine metabolism
arhd00650
Butanoate metabolism
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01120
Microbial metabolism in diverse environments
arhd02024
Quorum sensing
Module
arhd_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VSH64_34020
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VSH64_34020
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VSH64_34020
00430 Taurine and hypotaurine metabolism
VSH64_34020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSH64_34020
Enzymes [BR:
arhd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
VSH64_34020
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
WSE27837
UniProt:
A0ABZ1I098
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Position
complement(7381483..7382874)
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AA seq
463 aa
AA seq
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MVLHSGEQNGSNRKSGTNPLYAGANPALAADFVMPHNKLRDDPLPPDAALQLVRDELMLD
GNARLNLATFVTTWMEPQARDLMAECVDKNMIDKDEYPQTAELERRCVNILADLWHAPDP
TDIMGCSTTGSSEACMLAGMALKRRWTKLGRTGKPNLVMGVNVQVCWDKFCEYWEVEPRL
VPMDGDRLHLSAEEAVKRCDENTIGVVAILGSTFDGSYEPVAEIAAALDDLQARTGWDIP
VHVDGASGAMIAPFLDEDLAWDFRLPRVASINTSGHKYGLVYPGVGWVVWRNREALPSEL
VFNVNYLGGDMPTFALNFSRPGAEVAAQYYTFVRLGREGFRAVQQASRDVALHLSDAIAA
LGPFKLLTRGDQLPVFAFTTNPDVTSYDVFDVSRRLRERGWLVPAYTFPEKRTDLAVLRV
VVRNGFTHDLADLLLDDLRRTLPELERQSAPQHDPATSTAFHH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcacagcggggaacagaacgggtccaaccgtaaatcgggcacgaatcccctg
tacgcaggggcaaatcccgccctggcggcagacttcgtgatgccgcacaacaagctgcgc
gacgacccgctgccgccggacgccgcgttgcagctcgtgcgcgacgagctgatgctcgac
ggcaacgcgcggctcaacctggccacgttcgtcaccacgtggatggagccgcaggcgcgc
gacctgatggccgagtgcgtggacaagaacatgatcgacaaggacgagtacccgcagacg
gccgagctcgagcggcgctgcgtgaacatcctcgccgatctgtggcacgcgcccgatccc
accgacatcatgggctgctcgaccacgggctcgtcggaggcgtgcatgctcgccggcatg
gcgctgaagcggcgctggacgaagctcggccgcaccgggaagcccaacctggtgatgggc
gtgaacgtgcaggtgtgctgggacaagttctgcgagtactgggaggtcgagccccgcctg
gtgcccatggacggcgaccggttgcacctgtccgccgaagaagcggtgaagcgctgcgac
gagaacaccatcggcgtggtcgccatcctcgggtccactttcgacggcagctacgaaccc
gtcgccgagatcgccgccgctctcgacgacctgcaggcccgcaccggctgggacatcccg
gtccacgtcgacggcgcctcgggcgcgatgatcgcgccgttcctcgacgaggacctggcg
tgggacttccgcctgccgcgcgtcgcgtcgatcaacacgtcggggcacaagtacggcctc
gtgtaccccggcgtcggctgggtcgtgtggcgcaaccgcgaggcgctgccctccgagctg
gtgttcaacgtcaactacctcggcggcgacatgccgacgttcgccctcaacttctcccgc
cccggcgcggaagtggcagcgcagtactacaccttcgtgcgcctgggccgcgaaggcttc
cgcgccgtgcagcaagcctcccgcgacgtcgccctccacctctccgacgcgatcgccgcc
ctcggccccttcaagctcctcacccgcggcgaccagctgccggtgttcgccttcaccacc
aacccggacgtcacctcctacgacgtcttcgacgtctcccgccgcctccgcgaacgcggc
tggctcgtcccggcctacaccttcccggaaaaacggaccgacctggcggtcctccgcgtc
gtcgtccgcaacggcttcacccacgacctggccgacctcctcctcgacgacctccgccgc
accctgccggaactggaacgccaatccgcaccacaacacgacccggccacgtcgacggct
ttccaccactga
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