Amycolatopsis rhabdoformis: VSH64_36940
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Entry
VSH64_36940 CDS
T09694
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arhd03032
]
VSH64_36940 (gyrA)
03400 DNA repair and recombination proteins [BR:
arhd03400
]
VSH64_36940 (gyrA)
Enzymes [BR:
arhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VSH64_36940 (gyrA)
DNA replication proteins [BR:
arhd03032
]
Prokaryotic type
DNA Topoisomerases
VSH64_36940 (gyrA)
DNA repair and recombination proteins [BR:
arhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VSH64_36940 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SGL
LcrG
Motif
Other DBs
NCBI-ProteinID:
WSE28383
LinkDB
All DBs
Position
8023142..8025760
Genome browser
AA seq
872 aa
AA seq
DB search
MTETLPPEHDRIEPVDIQQEMQRSYIDYAMSVIVSRALPDVRDGLKPVHRRVLYSMFDSG
FRPDRGYNKCSRVVGDVMGNYHPHGDSAIYDALVRLAQPWSMRYPLIDGQGNFGSPGNDP
AAAMRYTESRLAPLAMQMLADIEEDTVDFSDNYDGRTQEPDVLPARFPNLLVNGGSGIAV
GMATNIPPHNLREVADGVVWALENYEATDDELLAALLTRVKGPDFPTKAMILGTSGIEDA
YRTGRGSVRMRAVVEVEEDAKGRTTLVVSELPYQVNPDNLVENIAHLVRDGKLTGIADIA
DESNSRSGMRIVVTIKRDAVAKVVLNNLFKHTQLQQNFGVNMLALVDGVPRTLRLDQMIR
HYVKHQVEVIVRRTKFRLQKAEERAHILRGLVKALDLLDEVIALIRRSPSAEEARPALME
LLDVDEIQATAILDMQLRRLAALERQRIIDTLAEIELEIADLKDILEKPERQRSIIREEL
MEIVDKYGDDRRTKIIPFDGEVSVEDLIAVEDVVVTITRTGYAKRTKTDLYRSQKRGGKG
VQGATLKQDDIVQHFFVCSTHDWILFFTNKGRVYRTKAYDLPEANRNARGQHVANLMAFQ
PDEQIAQVIEIPNYEVAPYLVLATQKGLVKKTKLTDFDSNRAGGLIAINLREGDELVGAV
LAAAEDDLLLVSAGGQSIRFHATDEALRPMGRPTSGVLGMRFNDGDELLGISVVKPDKFL
LVATDGAYGKRTPIEDYPVQGRGGKGVLTIQHDSKRGRLVGALIVDEDDELFAITSSGGV
IRTPARDVRKAGRQTKGVRLMNLGDGTTLLAVARNADEGSDVANGGEDSSEAESDEVSTD
SVDSAEVTPAAEGEATTAPEETTEEDGTAPEQ
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaccttgccgccggaacacgaccgcatcgagccggtcgacatccagcaggag
atgcagcgttcctacatcgactacgccatgagcgtgatcgtgtcgcgggcgctgccggac
gtgcgcgacggtctcaagccggtgcaccgccgcgtgctctactcgatgttcgactccggt
ttccggccggatcgcgggtacaacaagtgctcgcgcgtcgtcggcgacgtcatgggcaac
taccacccgcacggtgactcggcgatctacgacgcgctcgtgcgcctggcccagccgtgg
tcgatgcgctacccgctcatcgacgggcagggcaacttcggctcgccgggcaacgacccc
gccgccgccatgcggtacacggagtcgcgcctcgcgccgctggcgatgcagatgctggcg
gacatcgaagaagacaccgtcgacttctccgacaactacgacggccgcacgcaggagccc
gacgtgctgccggcgcggttcccgaacctgctggtcaacggtggttccggcatcgcggtc
ggcatggcgaccaacatcccgccgcacaacctgcgcgaggtcgccgacggtgtcgtgtgg
gcactggagaactacgaagcgaccgacgacgagctgctggccgcgctgctcacgcgggtc
aagggcccggacttcccgaccaaggcaatgatcctcggcacgtccgggatcgaggacgcg
taccgcacgggccgcggttccgtgcgcatgcgtgcggtcgtcgaggtggaagaggacgcg
aagggccgcacgacgctggtcgtgtccgagctgccgtaccaggtgaacccggacaacctc
gtcgagaacatcgcgcacctcgtgcgcgacggcaagctcacgggcatcgccgacatcgcc
gacgagtccaacagccgctcgggcatgcggatcgtggtcacgatcaagcgcgacgccgtg
gcgaaggtggtgctgaacaacctgttcaagcacacccagctccagcagaacttcggcgtg
aacatgctggccctggtcgacggcgtgccgcgcacgctgcgcctggaccagatgatccgg
cactacgtgaagcaccaggtcgaggtcatcgtccggcggaccaagttccgcctgcagaag
gccgaagagcgcgcgcacatcttgcgcggtctggtcaaggcactcgacctgctcgacgag
gtgatcgccctgatccggcgctcgccctcggccgaagaggcccggccggcgctgatggaa
ctgctggacgtcgacgagatccaggccaccgcgatcctcgacatgcagctgcgccgcctc
gccgccctcgaacgccagcgcatcatcgacacgctggccgagatcgagctggagatcgcg
gacctcaaggacatcctcgagaagccggagcgccagcgctcgatcatccgtgaagagctc
atggagatcgtcgacaagtacggcgacgaccgtcgcacgaagatcatcccgttcgacggc
gaggtgtcggtcgaggacctgatcgcggtcgaggacgtcgtcgtcacgatcacccgcacc
ggctacgcgaagcgcacgaagaccgacctgtaccgctcgcagaagcgcggcggcaagggt
gtgcagggcgccacgctgaagcaggacgacatcgtgcagcacttcttcgtgtgctccacg
cacgactggatcctgttcttcacgaacaagggccgcgtctaccgcaccaaggcctacgac
ctgcccgaggccaaccgcaacgcgcgcggccagcacgtggccaacctcatggcgttccag
cccgacgagcagatcgcccaggtcatcgagatcccgaactacgaggtggcgccgtacctg
gtgctcgccacgcagaaggggctcgtgaagaagaccaagctcaccgacttcgactccaac
cgcgcgggtggcctcatcgccatcaacctgcgcgaaggcgacgagctcgtgggcgccgtg
ctggcggcggcggaggacgacctgctgctcgtgtcggccggcggccagtcgatccgcttc
cacgccaccgacgaggcgctgcgtccgatgggccgcccgacgtccggtgtgctcggcatg
cggttcaacgacggcgacgaactgctcggcatcagcgtggtcaagcccgacaagttcctg
ctggtcgcgaccgacggcgcgtacggcaagcgcacgccgatcgaggactacccggtgcag
ggccgcggcggcaagggtgtgctgaccatccagcacgactcgaaacgtggcaggctggtg
ggcgcactcattgtcgacgaggacgacgagctgttcgccatcacctcgagcggtggggtc
atccgcacgccggcgcgcgacgtgcgcaaggccggtcgccagaccaagggcgtgcggctg
atgaatctgggagacgggaccactcttctcgcggtcgcacgcaacgcggacgaggggtcg
gacgtcgccaatggtggcgaggactcttccgaagccgagtccgatgaagtttcgacggat
tcggtcgactcggcggaggtgacccccgccgccgaaggcgaggcgaccaccgcgcccgag
gagaccacggaagaagacggcacggcgccggagcagtga
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