Amycolatopsis rhabdoformis: VSH64_37475
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Entry
VSH64_37475 CDS
T09694
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSH64_37475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhd02000
]
VSH64_37475
Transporters [BR:
arhd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VSH64_37475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
AAA_16
AAA_29
AAA_22
DUF87
RsgA_GTPase
NACHT
nSTAND1
AAA_5
AAA_23
ATP-synt_ab
MMR_HSR1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WSE28481
LinkDB
All DBs
Position
8121890..8122663
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AA seq
257 aa
AA seq
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MIEVRDLHRKYAPRDVHALRGVSFDVEEGQRFGIVGESGSGKSTLVRLLAALDRPTSGTV
SFDGRRIDNLPERRLGFLRSSMQIVFQDPMGSLDPRMRVRDIISEPLGRRSPLRVAELLE
AVGLPADAAARYPHQFSGGQRQRISIARALAPNPRVLLADEPVSALDVSVRKQILDLLTR
LVAEFSLTLVFVSHDLGVVRHVCDRVAVMRRGEIVELGDVEEVYETPRHEYTRELLAAAP
DLRAELARLSGGSADDA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagtccgtgacctgcaccggaagtacgcgccccgcgacgtccacgcgttgcgc
ggcgtgagcttcgacgtcgaggaagggcagcggttcgggatcgtcggcgagtcgggctcg
ggcaagtccacgctggtgcgcctgctggccgcgctggatcggccgacgtcgggcacggtc
tcgttcgacggccgccggatcgacaacctgcccgaacgccggctgggcttcctgcgctcg
tcgatgcagatcgtcttccaggacccgatgggttccctcgacccgcggatgcgcgtgcgg
gacatcatctccgagccgctgggccggcgttcgccgttgcgggtggccgagctgctggag
gccgtcggcctgcccgccgacgcggctgcccgctacccgcaccagttctccggcggccag
cggcagcggatctccatcgcgcgagcgctggcacccaacccgcgcgtgctgctggccgac
gagccggtgagcgcgcttgacgtgtccgtgcgcaagcagatcctcgacctgctcacgcgg
ctggtggcggaattttcgctcacgctggtgttcgtgtcgcacgacctcggcgtggtgcgg
cacgtgtgcgaccgcgtcgcggtgatgcggcgcggggagatcgtggagctgggagacgtg
gaggaggtttacgagacaccgcggcacgagtacacccgggaactgctggcggccgcaccc
gacctgcgcgccgagctggcccggctgagcggagggagtgcggacgatgcctga
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