Amycolatopsis rhabdoformis: VSH64_39085
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Entry
VSH64_39085 CDS
T09694
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arhd03000
]
VSH64_39085
Transcription factors [BR:
arhd03000
]
Prokaryotic type
Helix-turn-helix
IclR family
VSH64_39085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
Rrf2
HTH_11
HVO_A0261_N
HTH_5
HTH_20
MarR_2
TrmB
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
WSE28780
UniProt:
A0ABZ1I565
LinkDB
All DBs
Position
8442774..8443544
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AA seq
256 aa
AA seq
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MSDVPAVLNAVRLLERIARDWPEPVSSGALIEELGLNRSTAYNILGTLQRAGWTATRGDR
GGWTLGPRLLSMSRVSEDWMTDIVQQELDSLSQRTGFIVFAVQRHGAAEYSVLAKGDRGK
GVRITVGIGDTFPFSAPAIMRAFYAWEDPANVERLAERYGLEGFTPETVTTRARLREVLA
TTRERGYSTSIREFDLGQSGVGAPVFDAQRRVSMVVCTLAFSSELNESTVDHHGELIREC
GLRITDRTGGAVKIVE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgttccggcagtgctgaatgcggtgcggctcctggagcggattgcccgcgat
tggcccgaaccggtgtcctccggggcgctgatcgaggagctggggctcaatcggagcacc
gcctacaacatcctcggcacgctgcagcgggccggctggaccgccacgcgcggcgaccgc
ggcggctggacgctcgggccgcggctgttgtcgatgtcacgtgtttccgaggactggatg
accgacatcgtgcagcaggagctcgattcgctgagccaacgcacgggcttcatcgtgttc
gccgtgcagcgccacggtgccgcggagtattcggtgctggcgaagggtgaccgcggcaag
ggggtgcggatcaccgtggggatcggcgacaccttccccttctccgcgcccgcgatcatg
cgcgcgttctacgcctgggaggacccggccaacgtcgagcggctcgcggagcgctacggg
ctcgaggggttcacccccgagaccgtcaccacgcgtgctcgcctgcgtgaggtgctcgcg
accacccgcgaacgcggctacagcacgagtatccgggagttcgacctcggccagtccggc
gtcggggcgcctgtgttcgacgcgcagcggcgcgtgtcgatggtcgtgtgcacgctcgcg
ttctcgtcggaactcaatgaatccactgtggatcatcacggtgagctgatccgcgaatgc
ggactcaggatcaccgatcgaaccggaggtgcggtgaaaatcgtcgaatag
DBGET
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