Amycolatopsis rhabdoformis: VSH64_41375
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Entry
VSH64_41375 CDS
T09694
Name
(GenBank) MerR family transcriptional regulator
KO
K22491
MerR family transcriptional regulator, light-induced transcriptional regulator
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arhd03000
]
VSH64_41375
Transcription factors [BR:
arhd03000
]
Prokaryotic type
Helix-turn-helix
MerR family
VSH64_41375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
HTH_Tnp_1
HTH_28
B12-binding_2
HTH_Tnp_ISL3
HTH_17
HTH_23
CENP-B_N
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
WSE29198
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Position
8895568..8896509
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AA seq
313 aa
AA seq
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MGSGAREGEPTLPVASVARRLGVAPSTLRTWDRRYGLGPSRHTDGRHRRYGSSDIDRLEL
MQRALLRGASTAEAARFALQQMPRTEIVPIADEPVTPAHAEPADGEVSSRLARRLSTAAL
AMDVGAVQRMLAEALGELGVLPAWSGVVEPVLTALGARWRGVSAGAEVEYLLAECVYAAL
VRATPVLDAPRNLRPVLLACVPEERDTMPVYALAAALAGRRIGAQLFGVPLPAEVLAVAV
RRSAPAAVVLWAHRRDAADPRLFARVSRGRQRSRLFACGPGWDAGALPDKVELLADLPAA
AGRVEHVLVGAGR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgggatccggagcgcgtgaaggagaacccaccctgccggtggcctcggtcgcacgccgg
ctcggggtcgccccgtcgaccctccgtacctgggaccggcgctacggcctgggccccagc
cgccacaccgacggccggcaccgccgctacggcagctccgacatcgatcgcctcgagctc
atgcagcgcgccctgctccgcggcgcctccaccgccgaggccgcccgcttcgcgctgcag
cagatgccgcgcacggagatcgtcccgatcgccgacgaacccgtcacgcccgcgcacgcc
gagcccgccgacggtgaggtgtcctcgcgcctggcccgccgcctgagcacggccgcgctg
gccatggacgtcggcgccgtgcagcgcatgctcgccgaggccctcggcgagctcggcgtg
ctgccggcgtggtccggggtggtggagccggtgctcacggcgctcggcgcgcgctggcgc
ggggtgagcgcgggcgccgaggtcgaatacctgctggccgagtgcgtgtacgcggcgctc
gtgcgcgcgacccccgtgctcgacgcgccccgcaacctgcgcccggtgctgctcgcctgc
gtgccggaagaacgcgacaccatgcccgtgtacgcgctcgcggccgcgctggcggggcgg
cggatcggcgcgcagctgttcggcgtgccactgcccgccgaggtgctggcggtggccgtg
cggcgcagcgcgcccgccgccgtggtgctgtgggcgcaccggcgcgacgcggcggacccg
cggctgttcgcgcgcgtgtcccgcggccgccagcgcagccggctgttcgcgtgcgggccg
ggctgggacgccggcgccctgcccgacaaggtcgagctgctcgccgacctgccggccgcc
gccggccgcgtcgagcacgttcttgtcggggccgggcgctag
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