Amycolatopsis rhabdoformis: VSH64_41575
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Entry
VSH64_41575 CDS
T09694
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00020
Citrate cycle (TCA cycle)
arhd00640
Propanoate metabolism
arhd00660
C5-Branched dibasic acid metabolism
arhd00720
Other carbon fixation pathways
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01120
Microbial metabolism in diverse environments
arhd01200
Carbon metabolism
Module
arhd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
arhd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VSH64_41575 (sucD)
00640 Propanoate metabolism
VSH64_41575 (sucD)
00660 C5-Branched dibasic acid metabolism
VSH64_41575 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
VSH64_41575 (sucD)
Enzymes [BR:
arhd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
VSH64_41575 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
F420_oxidored
DUF5678
Motif
Other DBs
NCBI-ProteinID:
WSE29233
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All DBs
Position
8941037..8941924
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AA seq
295 aa
AA seq
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MSIFLNENSKVIVQGLTGSEGMKHATKMLKSGTNIVGGVNARKAGQTVSIEGKDLKVFGT
VEEAIKETGADVSVIFVPPKFAKDAVLEAVDAEIPLAVVITEGIPVHDSAYFWAHAVAKG
NKTRIIGPNCPGVISPGKSNAGIIPADISGPGHIGLVSKSGTLTYQMMYELRDIGFSTAV
GIGGDPIIGTTHIDALEAFEKDAETKVIVMIGEIGGDAEERAAAFIKEHVTKPVVGYVAG
FTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAVLARELYNNL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcttcctgaacgagaacagcaaggtcatcgtgcaggggctcaccggctccgag
ggcatgaagcacgcgaccaagatgctgaagtccggcacgaacatcgtgggtggcgtcaac
gcccgcaaggccggccagaccgtgagcatcgagggcaaggacctgaaggtcttcggcacc
gtcgaagaggccatcaaggagaccggcgccgacgtgtcggtcatcttcgtgccgccgaag
ttcgccaaggacgccgtgctcgaggccgtcgacgccgagatcccgctcgccgtggtgatc
accgagggcatcccggtccacgactcggcctacttctgggcccacgccgtggccaagggc
aacaagacccgcatcatcggcccgaactgccccggcgtgatcagcccgggcaagtccaac
gccggcatcatccccgccgacatctcgggcccgggccacatcggcctcgtctcgaagtcc
ggcacgctgacctaccagatgatgtacgagctgcgtgacatcggcttctccaccgccgtc
ggcatcggcggtgaccccatcatcggcaccacccacatcgacgccctcgaggcgttcgag
aaggacgccgagaccaaggtcatcgtgatgatcggtgaaatcggtggcgacgccgaggag
cgggccgcggccttcatcaaggagcacgtgaccaagccggtcgtcggctacgtcgcgggc
ttcaccgcccccgagggcaagaccatgggtcacgcgggtgcgatcgtgtccggttcgtcc
ggcacggcggccgcgaagaaggaggccctcgaggctgccggcgtgaaggtcggcaagacc
ccgagcgagaccgccgtcctcgcgcgcgagctgtacaacaacctctga
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