Amycolatopsis rhabdoformis: VSH64_41795
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Entry
VSH64_41795 CDS
T09694
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00020
Citrate cycle (TCA cycle)
arhd00190
Oxidative phosphorylation
arhd00650
Butanoate metabolism
arhd00720
Other carbon fixation pathways
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01120
Microbial metabolism in diverse environments
arhd01200
Carbon metabolism
Module
arhd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
arhd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
arhd_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VSH64_41795 (sdhA)
00650 Butanoate metabolism
VSH64_41795 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
VSH64_41795 (sdhA)
00720 Other carbon fixation pathways
VSH64_41795 (sdhA)
Enzymes [BR:
arhd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VSH64_41795 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
FAD_oxidored
GIDA
Motif
Other DBs
NCBI-ProteinID:
WSE29276
UniProt:
A0ABZ1I6D6
LinkDB
All DBs
Position
complement(8986364..8988118)
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AA seq
584 aa
AA seq
DB search
MQFHKYDVVIVGAGGAGMRAAIESGQRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAAVRRACYAADRTGHMILQTLYQNCVKYGTEFFNEFYVLDLVTSEDENGNPIASG
VVAYELATGELHVFQAKSIVFATGGAGKIFKTTSNAHTLTGDGLGIIFRKGLPLEDMEFF
QFHPTGLAGLGILISEAVRGEGGILRNSEGERFMERYAPTIKDLAPRDIVARSMVQEVLQ
GRGMGPNKDYVVLDVTHLPVEVLETKLPDITEFSRTYLGVDPVKEPVPVFPTCHYVMGGI
PTNIHGEALRDNENVIPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAGIAAAEYAL
AHEHVELPELPTKLVEEQLSGLLSEHGDERVADIRKEMQQTMDSHASVYRTEDTLKQALT
DIQALKERYTRITVSDKGKRYNTDLLEAVELGFLLELAEVLIVGALARKESRGGHAREDY
PTRDDTNFMRHTMAYKQGEGLSADIRLDYKPVTFTRYEPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccacaagtacgacgtggtgatcgtcggtgccggcggcgccggcatgcgcgcg
gccatcgagtccggccagcgcgcccgcaccgcggtcctcacgaagctgtacccgacgcgg
tcccacaccggcgccgcccagggcggcatgtgcgccgcgctggcgaacgtcgaagaggac
aactgggagtggcacaccttcgacaccgtcaagggcggtgactacctggtcgaccaggac
gcggcggagatcatggccaaggaggccatcgacgcggtcctcgacctggagaagatgggc
ctgccgttcaaccgcacgcccgagggcaagatcgaccagcgccgcttcggcggccacaca
cgtgaccacggcaaggccgcggtgcgccgcgcctgctacgccgcggaccgcaccggccac
atgatcctgcagacgctgtaccaaaactgcgtcaagtacggcacggagttcttcaacgag
ttctacgtgctcgacctcgtgaccagcgaggacgagaacggcaacccgatcgcgtccggc
gtggtggcctacgagctggccaccggcgagctgcacgtgttccaggccaagtccatcgtg
ttcgccaccggcggcgcgggcaagatcttcaagacgacgtcgaacgcgcacaccctcacc
ggtgacggcctcggcatcatcttccgcaagggcctgccgctggaggacatggagttcttc
cagttccacccgaccggcctcgcgggcctgggcatcctgatctccgaagccgtccgcggc
gagggcgggatcctgcgcaactccgagggcgagcgcttcatggagcgctacgcccccacc
atcaaggacctcgcgccgcgcgacatcgtcgcccgctcgatggtccaggaggtgctgcag
ggccgcggcatgggcccgaacaaggactacgtggtcctcgacgtgacccacctgccggtg
gaggtcctcgagaccaagctgccggacatcaccgagttctcgcgcacctacctgggcgtc
gacccggtgaaggagccggtgccggtgttcccgacgtgtcactacgtgatgggcggcatc
ccgaccaacatccacggcgaagcgctgcgcgacaacgagaacgtgatcccgggcctgtac
gcggccggcgaggtcgcgtgcgtgtcggtgcacggctcgaaccgcctgggcaccaactcg
ctgctggacatcaacgtgttcggccgccgggcgggcatcgcggccgcggagtacgcgctg
gcccacgagcacgtggagctgccggagctgccgaccaagctggtcgaggagcagctctcg
ggtctgctgtcggagcacggtgacgagcgcgtcgccgacatccgcaaggaaatgcagcag
acgatggactcgcacgcttcggtgtaccgcaccgaggacacgctcaagcaggcgctcacg
gacatccaggcgctgaaggagcggtacacgcggatcaccgtgtcggacaagggcaagcgg
tacaacaccgacctgctcgaggccgtcgagctgggcttcctgctcgagctggccgaggtc
ctgatcgtgggcgccctggcgcgcaaggagtcccgcggcggccacgcccgcgaggactac
ccgacccgcgacgacacgaacttcatgcgccacaccatggcgtacaagcagggcgagggc
ctctcggccgacatccgcctcgactacaagccggtgaccttcacgcgatacgagccgatg
gagcggaagtactga
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