Amycolatopsis rhabdoformis: VSH64_42510
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Entry
VSH64_42510 CDS
T09694
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00061
Fatty acid biosynthesis
arhd00071
Fatty acid degradation
arhd01100
Metabolic pathways
arhd01212
Fatty acid metabolism
arhd02024
Quorum sensing
arhd04146
Peroxisome
Module
arhd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VSH64_42510
00071 Fatty acid degradation
VSH64_42510
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VSH64_42510
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSH64_42510
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
arhd01004
]
VSH64_42510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arhd04147
]
VSH64_42510
Enzymes [BR:
arhd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VSH64_42510
Lipid biosynthesis proteins [BR:
arhd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VSH64_42510
Exosome [BR:
arhd04147
]
Exosomal proteins
Exosomal proteins of breast milk
VSH64_42510
Exosomal proteins of breast cancer cells
VSH64_42510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WSE29409
LinkDB
All DBs
Position
complement(9131332..9133023)
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AA seq
563 aa
AA seq
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MAITASTPPPGLPASLDYPEVPVGSILAGAATRFGDRTAFAMGDDSLTYTETYAGACKFA
NALLARGIGHGDVVAIHLPNCLAYPIAYYGTLLAGATFSPTNPLLPPDDLAFQLTDCEAA
AVVTFGPVAGTVAAVADRIPARLTIVVAPTAPTAPSTPTTTAGGTDVVEFKQFFAEAPAT
RPEVAIDVHHDLAHLAYTGGTTGRSKGVELTHANIVANTLQSACWSSGSVPVLDPHGDVI
LDQIGSEEEWPGRLGTGVAINLTPWFHAMGVIAGLNALLLSGNRTVLHARFDPAAYVADA
ERLRVTSLGGAPALFAALLATPAFHTADLSSVRSIGSGAAPMNHEMIRALHERFPGVVIA
EGYGLTEMTMGAVISPSYRSGVRKVGSVGGPIFDTEVKIVGLDETPLPAGAEGEVCLRGP
QMMRGYRNRPDETAAALVEGWLHTGDIGVLDDDGYLSIVDRKKDMLLYKGYNVFPRELEE
LLIALPGVAAAAVVGRPQVEVGELPVAFVVRQPDADLDAAGLIAAVNEKVVPYKRIRELY
FVDEIPVSAAGKVLKRELRKQLP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggccatcaccgcgtcgaccccgccgcccggattgcccgcttcgctcgactaccccgag
gtcccggtgggttcgatactcgccggcgccgccacccgcttcggtgatcgcacggcgttc
gccatgggcgacgacagcctcacctacaccgaaacgtacgcaggcgcctgcaagttcgcc
aacgcgctgctcgcccgcggcatcgggcacggcgacgtggtggcgatccacctgcccaac
tgcctcgcctacccgatcgcctactacggcaccctgctcgccggcgccacgttcagcccc
acgaacccgctgctcccgcccgacgacctcgccttccagctcaccgactgcgaggccgcc
gccgtggtcacgttcgggccggtggcgggcacggtcgccgccgtcgcggaccggatcccg
gcccggctcacgatcgtggtcgcaccgacagcaccgacagcaccgtcaaccccgacaaca
acggccggcggaaccgacgtcgtcgagttcaagcagttcttcgccgaagcccccgccacc
cggcccgaagtggccatcgacgtgcaccacgacctcgcccacctcgcctacaccggcggc
accaccggccggtcgaaaggcgtcgagctcacgcacgccaacatcgtggccaacacactg
cagagcgcctgctggagcagcggttcggtgcccgtgctggacccgcacggcgacgtgatc
ctcgaccagatcggcagcgaggaagagtggcccggccggctcggcaccggcgtcgccatc
aacctcacgccgtggttccacgcgatgggcgtgatcgccggcctcaacgccctgctgctc
agcggcaaccggaccgtgctgcacgcgcggttcgacccggccgcgtacgtcgccgacgcc
gagcgcctgcgcgtgacctccctcggcggcgcaccggcgctgttcgctgccttgctggcc
acgcccgcgttccacaccgccgacctgtcgtccgtgcgcagcatcggctccggcgcggcg
ccgatgaaccacgagatgatccgtgcgctgcacgaacgcttccccggcgtggtgatcgcc
gagggctacggcctcaccgagatgaccatgggcgcggtgatctcgccgtcgtaccggtcg
ggcgtgcgcaaggtgggctcggtcggcgggccgatcttcgacaccgaggtgaagatcgtc
ggcctggacgagactccgctgcccgccggcgccgagggcgaggtctgcctgcgcggcccg
cagatgatgcgcggctaccgcaaccggccggacgaaaccgccgccgccctggtcgagggc
tggctgcacaccggcgacatcggcgtgctcgacgacgacggctacttgtccattgtggac
cgcaagaaggacatgctgctgtacaagggttacaacgtgttcccgcgcgagctcgaggag
ctgctgatcgcactgcccggcgtggccgcggccgcggtggtcggccgtccgcaggtcgag
gtcggcgagctgcccgtcgcgttcgtggtgcggcagccggacgccgaccttgacgcggcc
gggctgatcgccgccgtgaacgagaaggtggtgccgtacaagcggatccgggagctgtac
ttcgtcgacgagatcccggtgtcggccgcggggaaggtgctgaagcgggagctgcgcaag
cagctgccctga
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