Amycolatopsis rhabdoformis: VSH64_43065
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Entry
VSH64_43065 CDS
T09694
Name
(GenBank) DEAD/DEAH box helicase
Organism
arhd
Amycolatopsis rhabdoformis
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
zf-CCHC_3
Motif
Other DBs
NCBI-ProteinID:
WSE29513
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Position
complement(9236073..9237851)
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AA seq
592 aa
AA seq
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MTTGLCALVTREAITLTAEQSTTEETTPAVALEHSETGPAALDTSHPLQAGVEVEPEAPT
FASFGVKPEIVKALAEAGIERTFAIQALTLPLAMAGDDLIGQARTGMGKTLGFGVPLLHR
VQVPGDGTPQVLVVVPTRELCIQVANDLKGAGKHLGIRTLAIYGGRPYEQQIEALRKGVD
VVIGTPGRLLDLAERKDLVLGKVRGLVLDEADEMLDLGFLPDIERILRMVPDERQTMLFS
ATMPGPIITLARTFLNQPTHIRAEENDASAIHERTTQFVYRAHSMDKPEVIARVLQSEGR
GLTMIFSRTKRTAQKVADDLVERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVA
ARGIDIDDVTHVINYQCPDDEKTYVHRIGRTGRAGRTGVAVTLVDWDEMPRWKLISDTLG
LDKPEPVETYSSSPHLFSDLGIPEGTTGRLPLAKRTRAGLAAEEEEDLGGKRRGRSAGGR
GGAGAGAGSEDAPRKRTRAPRKRTRGGAKAAEAVEKADAAASSASDGASGEERTRSRRRT
RGGGGGESTGPAGAATASASVSGETGETGERPARRRRRRRPSATSDTPASAD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaccggcctgtgcgcgctggtcacgagagaggcgatcaccctgaccgcagaacag
tccacaaccgaagagaccaccccggctgtcgcgctggaacacagcgagacgggccccgcc
gcgctcgacacgtcgcacccgctgcaggcgggcgtcgaggtcgagcccgaggcgcccacg
ttcgcgtcgttcggcgtgaagccggaaatcgtgaaggcgctggccgaggccggcatcgag
cgcacgttcgccatccaggcgctcacgctgccgctggccatggccggcgacgacctgatc
ggccaggcccgcaccggcatgggcaagacgctgggcttcggcgtcccgctgctgcaccgc
gtgcaggtgcccggcgacggcaccccgcaggtgctcgtcgtggtcccgacccgcgagctg
tgcatccaggtcgccaacgacctcaagggcgccggcaagcacctcggcatccgcaccctg
gccatctacggcggccgcccgtacgagcagcagatcgaagcgctgcgcaagggcgtcgac
gtcgtgatcggcaccccgggccgcctgctcgacctggccgagcgcaaggacctcgtgctg
ggcaaggtccgcggcctggtcctcgacgaggccgacgagatgctcgacctgggcttcctg
cccgacatcgagcgcatcctgcggatggtgcccgacgagcggcagaccatgctgttctcg
gctacgatgcccggcccgatcatcaccctggcccgcacgttcctgaaccagccgacgcac
atccgcgccgaggagaacgacgcgagcgcgatccacgagcgcaccacgcagttcgtctac
cgcgcgcactcgatggacaagcccgaggtcatcgcccgggtgctgcagtccgaaggccgc
gggctcaccatgatcttcagccgcaccaagcgcaccgcgcagaaggtggccgacgacctg
gtggagcgcggcttcgcggccgccgccgtgcacggtgacctcggccagggcgctcgcgag
caggcgctgcgcgcgttccgctcgggcaaggtcgacgtgctggtggccaccgacgtggcg
gcccgcggcatcgacatcgacgacgtcacccacgtgatcaactaccagtgcccggacgac
gagaagacctacgtccaccgcatcggccgcaccggccgcgcggggcgcaccggtgtcgcg
gtcacgctcgtcgactgggacgagatgccgcgctggaagctgatctccgacacgctgggt
ctggacaagccggagccggtcgagacctattcgtcgtcgccgcacctgttcagcgacctc
ggcatcccggagggcaccaccggccggctcccgctcgcgaagcggacccgtgccggcctg
gccgccgaggaggaagaggacctgggcggcaagcgccgcggccggagtgccggtggccgt
ggtggcgccggtgccggtgccggctcggaagacgcgccgcgcaagcgcacgcgggcgccg
cgcaagcgcacccgcggtggcgcgaaggcagccgaggccgtcgagaaggccgacgccgct
gcttcttctgcttccgacggcgcttcgggtgaagagcgcacgcgctcgcgtcgccgcacc
cgtggtggtggcggtggtgagtcgaccggtcccgccggcgcggccaccgcatcggcctcg
gtttcgggagaaaccggggaaacgggcgagcgtccggcacgtcggcgccgtcgtcgccgc
ccctccgcgacgtctgatacacctgcgtcggcagactga
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