Amycolatopsis rhabdoformis: VSH64_43570
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Entry
VSH64_43570 CDS
T09694
Symbol
lysX
Name
(GenBank) bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VSH64_43570 (lysX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
arhd01007
]
VSH64_43570 (lysX)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arhd03016
]
VSH64_43570 (lysX)
Enzymes [BR:
arhd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
VSH64_43570 (lysX)
Amino acid related enzymes [BR:
arhd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VSH64_43570 (lysX)
Transfer RNA biogenesis [BR:
arhd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VSH64_43570 (lysX)
Prokaryotic type
Other AARSs
VSH64_43570 (lysX)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WSE29608
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All DBs
Position
9352304..9355627
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AA seq
1107 aa
AA seq
DB search
MGTPASARRRIPAWQARTGGIVATVVQLAAVFSVVLLLTGGTHGHLLNGIDMAFSALSVP
TSASLVIVLLLVVLGSALRRRKKAALYTLLLFQVGGLILTLAFQAVLLWAPDLLTLGPRQ
IRHIPMQLGVLTIADGISLLLIWLLLALRPAFPARLAPGAWRDGLAVLFGGLLVVVALGW
GLTEAFPGTLGDSWERLVWVVNHATGENLQLRKIGVGEGPAWIDVVLDLGATFVATGALY
TLFRGVRHRRRRTDDEELQLRGLLAEFGDDDSLGYFATRRDKSVVFAPNGRAAVTYRVLG
GTSVASADPVGDPDAWPDAVRAWLDETRSYGWIPGVLGASERGAKVYAAAGLRALEIGDE
AVLDVREFSLSGPERKSVRQAVKRIERAGYTARVRRHGEIPEGEMQALLTRAQQWRGAES
ERGFSMALGRLGDASDARSVMVEAYDAEGELRGLLSFVPWGRRGLSLDLMRRDRAAENGL
NEFLVAEVVAAAQHLGAQRISLNFAMFRAVFAEGERIGAGPVLRLWRSVLGLASRFFQLE
SLYRSNAKYGPDWEPRFLCYSSARRLPRVSIVAGALEGFVPTGRSRVLRHETVSDEFVTE
VRLIEESAARVVPKAMRRPEQVRVRVAKLDKLRDLGVDPYPVGFSREDLLGDVVAKFGEL
PADSRTGHRVRVAGRVLALRTLGGLCFARIKDFSGEVQLMLDATVLDLSGWRTGVDLGDH
VGVSGEVVTSRRGELSVLVDEWTVTAKCLHPLPDKRKGLTDPETRVRQRYLDLAVNPESA
QMLRLRSTVVRAVRERLHQGDYLEVETPMLQTVHGGANARPFVTHINAYDMRMYLRIAPE
LYLKRLCVAGVERVFELNRNFRNEGVDATHNPEFTMLEAYQAYADYNSMRDLTRELVQHA
AEAAFGAQIVRRLDADGRVTEHDISGDWPVIPVHEAVSAALGEQIDSGTSVATLRRLCLA
GGVPAGEDAGHGDLVLKAHEHLVEGSTVLPTFYTDYPTDVSPLTRQHRRDPLLAERWDLI
AFGSEVGTAYTELTDPIEQRRRLEAQSLRAASGDVEAMELDEDFLLALEHGMPPTGGLGL
GVDRLLMMLSGASIRQTVLFPFVRPHA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaccggcgagcgcacgcaggcgcatccccgcctggcaggccaggacgggcggc
atcgtcgcgaccgtggtgcagctcgccgccgtcttctcggtggtgctgctgctcaccggc
ggcacccacggacacctgctcaacggcatcgacatggcgttttccgccctcagcgtgccg
accagcgcgagcctggtgatcgtgctgctgctcgtggtcctcggctcggccttgcgccgg
cgcaagaaggccgcgctctacacgctgctgctcttccaggtcggcggcctgatcttgacg
ctggcgttccaggccgtgctgctgtgggcgcccgacctgctcacgctcggcccgcggcag
atccggcacatcccgatgcagctcggcgtgctcacgatcgccgacggcatttcgctgctc
ctgatctggctgctgctggccctgcgtccggccttcccggcgcgcctggcgcccggtgcc
tggcgcgacggcctggcggtgctgttcggcggcctgctcgtggtggtggcgctcggctgg
gggctcaccgaggcgttccccggcacgctcggcgactcgtgggaacggctggtgtgggtg
gtcaaccacgccaccggtgagaacctgcagctgcgcaagatcggcgtcggcgaggggccg
gcgtggatcgacgtggtgctcgacctcggcgcgacgttcgtggccaccggcgcgctgtac
acgctcttccgcggcgtgcgccaccgccgccggcgcaccgacgacgaggagctgcagctg
cgcggcctgctcgccgagttcggcgacgacgattcgctcggctacttcgccacgcgccgc
gacaagagcgtggtcttcgcgcccaacggccgcgcggccgtgacctaccgcgtgctgggc
ggcaccagcgtcgcgagcgccgacccggtcggcgacccggacgcgtggcccgacgcggtg
cgggcgtggctcgacgaaacccgttcgtacggctggattcccggcgtgctgggcgcgagc
gaacgcggtgccaaggtgtacgcggccgcgggcctgcgcgcgctggagatcggtgacgaa
gcggtgctcgacgtccgcgagttctccctcagcgggcccgagcgcaagtcggtgcgccag
gccgtgaaacggatcgaacgcgccggctacaccgcgcgggtgcgccgccacggcgaaatc
cccgaaggcgagatgcaggcgctgctcacgcgggcgcagcagtggcgcggcgccgagtcc
gagcgcggcttctcgatggcgctcggccggctcggcgacgcgagcgacgcccgcagcgtg
atggtggaggcctacgacgccgaaggtgagctgcggggcctgctgtccttcgtgccgtgg
gggcggcgcggcctttcgctcgacctgatgcgccgcgaccgggccgcggaaaacggcctc
aacgagttcctggtcgccgaggtcgtggccgccgcgcagcacctgggcgcgcagcggatc
tcgctcaacttcgccatgttccgggcggtcttcgccgagggcgagcgcatcggcgcgggc
ccggtgctgcgcctgtggcgttcggtgctcgggctggcgtcgcggttcttccagctggag
tcgctgtaccggtccaacgcgaagtacgggccggactgggagccgcggttcctctgctac
tcctcggcccggcggctgccgcgcgtcagcatcgtcgccggcgcgctcgaagggttcgtg
cccacgggccgctcgcgcgtgcttcgccacgagacggtgagcgacgagttcgtgacggag
gtccgcctcatcgaggagagtgccgcgcgagtcgtgccgaaggcgatgcgccggccggag
caggtgcgggtgcgggtggcgaagctggacaaactgcgcgatctcggcgtggacccgtac
cccgtcgggttcagccgcgaagacctgctgggcgacgtcgtggccaagttcggtgagctg
ccggcggactcgcgcaccgggcaccgcgtgcgcgtggccgggcgggtgctcgcactgcgc
acgctcggcggcctgtgtttcgctcgtatcaaggacttctcgggtgaagtgcagctgatg
ctcgacgcgacggtgctcgacctctcgggctggcgcaccggcgtggacctcggggaccac
gtgggcgtgagcggggaggtcgtgacctcgcgcaggggcgagctctctgtgctggtggac
gagtggacggtcaccgcgaagtgcctgcacccgttgccggacaagcgaaagggcctcacc
gaccccgagacgcgggtgcgccagcgctacctcgacctggccgtgaacccggagtcggcg
cagatgctgcggctgcggtccacggtggtgcgcgcggtgcgcgagcgcctgcaccagggc
gactacctcgaggtcgagacgccgatgctgcagaccgtccacggtggagcgaacgcgcgg
ccgttcgtcacgcacatcaacgcctacgacatgcggatgtacctgcgcatcgcgccggag
ctctacctcaagcgcctgtgcgtggcgggcgtggagcgcgtgttcgagctcaaccgcaac
ttccgcaacgaaggcgtcgacgccacgcacaaccccgagttcacgatgctcgaggcgtat
caggcctacgccgactacaactcgatgcgcgacctcacccgcgagctggtgcagcacgcc
gccgaggcggcgttcggcgcgcagatcgtgcgccggctcgacgccgacggccgggtgacc
gaacacgacatctccggcgactggccggtgatcccggtgcacgaggccgtttcggcggcg
ctcggggaacagatcgactcgggcacctcggtggccacgctccggcggctctgcctcgcg
ggcggcgtgccggcgggggaggacgccggccacggcgacctggtgctgaaggcccacgag
cacctcgtcgaaggatcgacggtgttgccgaccttctacaccgactaccccacggacgtc
tcgccgctgacccgccagcaccggcgtgacccgctgctggccgagcgctgggacctcatc
gcgttcggctcggaggtcggcaccgcctacaccgagctcacggacccgatcgagcagcgc
cgccgcctcgaagcccagtcgctgcgcgcggccagcggcgacgtggaggcgatggagctc
gacgaggacttcctgctcgcgctcgaacacggcatgccgcccaccggcgggctcgggctc
ggtgtggaccggctgctgatgatgctcagcggcgcgtcgatccggcagacggtgctgttc
ccgttcgtgcgcccgcacgcctga
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