Amycolatopsis rhabdoformis: VSH64_47015
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Entry
VSH64_47015 CDS
T09694
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00260
Glycine, serine and threonine metabolism
arhd00630
Glyoxylate and dicarboxylate metabolism
arhd00670
One carbon pool by folate
arhd00785
Lipoic acid metabolism
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01200
Carbon metabolism
Module
arhd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VSH64_47015 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VSH64_47015 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VSH64_47015 (gcvP)
00670 One carbon pool by folate
VSH64_47015 (gcvP)
Enzymes [BR:
arhd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
VSH64_47015 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
SepSecS
Motif
Other DBs
NCBI-ProteinID:
WSE30264
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All DBs
Position
10099417..10102308
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AA seq
963 aa
AA seq
DB search
MTEGELPVHRCARCPARGAPITSTPFDARHIGPAEAERAKMLAECGYGSLDTLVEAAVPS
AIRTMRDLDLPVAASEEEATAELRALAALNRPMTQMIGLGYSDTVTPGVIRRNVLENPAW
YTAYTPYQPEISQGRLEALLNFQTMVADLTGLTTANASMLDESTAVAEAMTLMRRSSKSK
SDVIVLDAECLPQTIAVVRTRAAALGIDVQVRDLLTGLPEEFFGVVVQYPGASGVLRGRG
FYHAVSEAAKAAGALYTVAADLLSLTLITSPGEFGADVAAGSTQRFGVPLGYGGPHAGYL
AVRAGLERSLPGRLVGVSVDADGNLAYRLALQTREQHIRREKATSNICTAQVLPAVLAAM
YGVYHGPDGLKAIATRVHELAAGFAAALRTGGVEVVHESFFDTVVAHVPGRAAEIHAAAR
EAGINLGHVDADHVRVACDEVTRPDTLAKVLRAFGIDGEVATATALPSGIVRESGFMSHE
VFSTHRSETSMLRYLRKLADLDYALDRGMIPLGSCTMKLNATTEMEPISWREFAGIHPFA
PAEDAEGYHRLVAQLSGWLAEVTGYDEVSLQPNAGSQGELAGLLAIRGYHHANGRPERDV
CLIPSSAHGTNAASAVLAGMRVVVVKCTDEGNVDLEDLQAKVDTHRDTLAAIMVTYPSTH
GVYEHGIERLAKIVHDGGGQVYVDGANLNALLGLAKPGEFGGDVSHLNLHKTFCIPHGGG
GPGVGPVAVRAHLAPYLPNHPLLDAAGPATGVGPISGAPYGSASILPISWAYVRMMGAPG
LTAATKVAVLAANYVAARLSPHYPVLYTGQDGLVAHECILDLRGITKDTGVSVDDVAKRL
IDYGFHAPTMSFPVSGTLMVEPTESEDLGEIDRFCDAMIAIRHEIDEVAAGRWTAETSPL
RGAPHTAETLVGEWTHDYDRELAVYPTGVSRKNKYWPPVRRIDGARGDRNLVCSCPPLNA
YEG
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggggagcttccagtgcaccgctgcgcccggtgcccggcccgaggagctccc
atcacctccacaccgttcgacgcccgccacatcggccccgccgaggccgagcgggccaag
atgctcgccgaatgcggttacggaagcctggacaccctcgtggaagcggctgttccgtcc
gccatccgcaccatgcgcgacctggacctgcccgtggccgcgtccgaagaggaagccacc
gccgagctgcgcgcgctcgccgcgctcaaccgcccgatgacgcagatgatcggcctcggc
tactccgacaccgtcacgccgggcgtgatccgccgcaacgtgctcgagaacccggcctgg
tacaccgcgtacacgccgtaccagccggagatctcgcagggccggctcgaagcgctgctc
aacttccagacgatggtcgccgacctcaccggcctcaccacggccaacgcgtcgatgctc
gacgagtcgaccgccgtcgccgaggccatgaccttgatgcgccgctcctcgaagtcgaag
tccgatgtgatcgtgctcgacgccgagtgcctgccgcagaccatcgcggtcgtgcgcacg
cgcgccgccgcgctgggcatcgacgtgcaggtgcgcgacctgctcaccgggctgccggag
gagttcttcggggttgtcgtgcagtaccccggcgcctccggtgtgctgcggggccgcggt
ttctaccacgccgtttccgaagccgcgaaggccgcgggcgccctgtacacggtggctgcc
gacctgctttcgctcacgctgatcacctcgccgggcgagttcggcgccgacgtcgcggcc
ggttccacgcagcgcttcggcgtgcccctgggctacggcggcccgcacgccgggtatctg
gccgtgcgcgccgggctcgagcgttcgctgccgggccggctggtgggtgtgtcggtggac
gccgacggcaacctggcctaccgcctcgcgctgcagacgcgtgagcagcacatccgccgc
gagaaggcgacgtcgaacatctgcaccgcgcaggtgctgccggccgtgctggccgcgatg
tacggcgtgtaccacggcccggacggcctgaaggccatcgcgacccgcgtgcacgagctg
gcggcgggcttcgccgcggccctgcgcaccggcggcgtcgaggtcgtgcacgagtccttc
ttcgacacggtcgtggcgcacgtgcccggccgcgccgccgagatccacgcggccgcgcgc
gaggccggcatcaacctgggccacgtcgacgccgaccacgtgcgcgtggcctgcgacgag
gtcacccggcccgacaccctggcgaaggtgctgcgcgcgttcggcatcgatggtgaagtg
gccacggccacggcgctgccgagcgggatcgtgcgcgagagcggcttcatgtcccacgag
gtgttcagcacgcaccgctccgagacgtcgatgctgcgctacctgcgcaagctcgccgac
ctcgactacgcgctcgaccgcggcatgatcccgctgggctcgtgcacgatgaagctcaac
gccaccaccgagatggagccgatcagctggcgcgagttcgcgggcatccacccgttcgca
ccggccgaggacgccgaggggtaccaccggctcgtggcgcagctctcgggctggctcgcc
gaggtcaccggctacgacgaggtgtcgctgcagcccaacgccggcagccagggtgagctc
gccggcctgctcgccatccgcggttaccaccacgccaacggccggccggagcgggacgtc
tgcctgatcccgtcgtcggcacacggcaccaacgccgcctccgccgtgctcgcgggcatg
cgcgtggtcgtggtgaagtgcaccgacgagggcaacgtggacctcgaagacctgcaggcc
aaggtggacacccaccgcgacacgctcgcggcgatcatggtcacctacccgtccacccac
ggcgtctacgagcacggcatcgagcggctcgcgaagatcgtgcacgacggcggcggccag
gtgtacgtggacggcgcgaacctcaacgcgctgctgggcctggcgaagccgggcgagttc
ggcggcgacgtgtcgcacctgaacctgcacaagaccttctgcatcccccacggcggtggc
ggccccggcgtcggcccggtcgcggtgcgcgcgcacctcgcgccgtacctgccgaaccac
ccgctgctcgatgccgcgggcccggccaccggcgtcggcccgatcagcggcgcgccctac
ggctcggcgtcgatcctgccgatctcctgggcgtacgtgcgcatgatgggtgcgcccggc
ctcacggcggccacgaaggtcgcggtgctcgcggccaactacgtcgccgcgcgcctctcg
ccgcactacccggtgctctacaccggccaggacggcctggtcgcgcacgagtgcatcctc
gacctgcgcggcatcaccaaggacaccggcgtgagcgtggacgacgtcgcgaagcggctc
atcgactacggcttccacgcgccgacgatgtcgttcccggtctcgggcacgctcatggtg
gagcccaccgagagcgaggacctcggcgagatcgaccgcttctgcgacgcgatgatcgcc
atccgccacgagatcgacgaggtcgccgccggccgctggaccgcggagacgagcccgctg
cgcggtgcgccgcacacggcggagacgctggtcggcgagtggacgcacgactacgaccgg
gagctcgcggtgtacccgaccggggtgtcgcgcaagaacaagtactggccgccggtgcgc
cggatcgacggggcgcgcggcgaccgcaacctcgtctgctcctgcccgcccctcaacgcg
tacgaaggctga
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