Amycolatopsis rhabdoformis: VSH64_47420
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Entry
VSH64_47420 CDS
T09694
Name
(GenBank) sensor histidine kinase KdpD
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VSH64_47420
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
arhd01001
]
VSH64_47420
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
arhd02022
]
VSH64_47420
Enzymes [BR:
arhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
VSH64_47420
Protein kinases [BR:
arhd01001
]
Histidine kinases
OmpR family
VSH64_47420
Two-component system [BR:
arhd02022
]
OmpR family
KdpD-KdpE (potassium transport)
VSH64_47420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
DUF4118
HATPase_c
HisKA
Usp
DUF2070
DUF5830
HATPase_c_2
FA_desaturase
DUF6057
Motif
Other DBs
NCBI-ProteinID:
WSE30339
LinkDB
All DBs
Position
10185585..10188167
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AA seq
860 aa
AA seq
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MSTPGTTPKPRRGELRIYLGAAPGVGKTFAMLGEARRRLERGTDVVVGLVETHGRQKTAD
LLDGLEIVPRRTVSHRGHEFAEMDLEAVLKRAPEVVVIDELAHTNVPGARHDKRWQDVEE
LLEAGIDVLSTVNVQHLQSLNDVVERITGVTQQETVPDEVVRKAEQLELVDITPEALRRR
LAHGNVYPAERIDAALGNYFRPGNLTALRELALLWVADQVDVALQRYRAEQKITDTWEAR
ERVVVSITGGPESETLIRRASRIATRAGAELQVVHILRGDGLSGLGPTAMARSRTLAEEV
GATFHAVVGDDVPTALLDFARGVNATQLVIGTSRRSRVARLFDEGIGAAVVQQSGSIDVH
MVTHSYAGGRLRARLGASPLAPSRLVIGWLLSLVLPVLATGLGVLLRDTVEFSTDVILYV
LATVIVALVGGLGPAVVAAVFGAGLLNFFFTPPLYTLNVHSPQNVVTLVAMIVVAVLVAL
VVASAARRGSQAARARTEAALLASYARTVLTNPNPIERLLEKVRENFGLTSVTLLEKKNG
AWQKVALAGQFPCADPDEADVDIAVTADVHLTLRGRALPAADRRVLEAVAGQALLALRQQ
RMATAAAAAERKAEATELRTTLLSAVGHDLRTPLTSIKAAIGSLRAPDLSLSEEDTGELL
EAIELSADRLAGLIDNLLDSSRLATGAVTPHLRPVGYDEVLAHALSNVDNSRDVKVAVDV
SLPSVLADPGLLERVIANVLDNALRHGGGVVSARASAHSEHVELRIVDHGKGLRKGTADS
AFAPFQRLGGDRDSTPGVGLGLSVAKGFIEAMGGSIRAEDTPGGGLTVVISLPAYTGQNP
DKDLLKIDEITDDAVEGVGT
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacacctggtacgaccccgaagccgcgccgaggagaactgcggatctacctcggc
gcggctccgggcgtgggcaagacgttcgcgatgctgggcgaggcccgccgccggctggag
cgcggcaccgacgtggtggtgggcctcgtggagacccacggccgccagaagacggccgac
ctgctcgacgggctcgagatcgtgccgcggcgcacggtgagccaccgcggccacgagttc
gccgagatggacctcgaagcggtgctgaagcgcgcgcccgaggtcgtggtgatcgacgag
ctggcacacaccaacgtgcccggcgcccgccacgacaagcgctggcaggacgtggaagag
ctgctcgaggccggcatcgacgtgctgtccacggtgaacgtgcagcacctgcagagcctc
aacgacgtcgtggagcgcatcaccggcgtcacgcagcaggagaccgtgcccgacgaggtc
gtccgcaaggccgagcagctggagctcgtggacatcacgccggaggcgctgcggcgccgg
ctcgcccacggcaacgtgtacccggccgagcgcatcgacgcggcgctgggcaactacttc
cggcccggcaacctcacggcgctgcgcgagctggcactgctgtgggtggccgaccaggtc
gacgtcgccctgcagcgctaccgcgccgagcagaagatcaccgacacgtgggaggcgcgc
gagcgcgtcgtcgtgtccatcaccggcgggccggagagcgagacgctgatccggcgcgcg
agccgcatcgccacgcgcgcgggcgcggagctgcaggtcgtgcacatcctgcggggcgac
gggctgtccggcctgggccccacggcgatggcgcgcagccgcacgctggccgaggaggtc
ggggccacgttccacgccgtggtgggcgacgacgtgcccacggcgttgctcgacttcgcg
cgcggggtgaacgccacgcagctcgtgatcggcacttcgcgccgctcgcgggtggcgcgg
ctgttcgacgagggcatcggcgcggccgtggtgcagcagtcgggctcgatcgacgtgcac
atggtcacgcactcctacgccggcggccggcttcgcgcgcgcctgggcgcgagcccgctg
gcgccgtcgcggctggtgatcggctggctgctgagcctcgtgctgccggtcctcgcgacc
ggcctgggcgtgctcctgcgcgacaccgtcgagttctccacggacgtgatcctctacgtg
ctggcgacggtgatcgtcgcgctcgtgggcgggctcggcccggcggtggtcgcggcggtg
ttcggcgcggggttgctcaacttcttcttcacaccaccgctgtacacgctcaacgtgcac
agcccgcagaacgtggtcacgctcgtggcgatgatcgtggtcgcggtgcttgtggcgctg
gtcgtcgcctcggcggcccggcgcggcagccaggccgcgcgggcgcgcacggaagcggcg
ctcctggcgtcgtacgcgcgcacggtgctcacgaatccgaacccgatcgagcgattgctc
gagaaggtgcgggagaacttcgggctgacctcggtcacgttgctggagaagaagaacggc
gcgtggcagaaggtggccctggccgggcagttcccgtgcgccgacccggacgaggccgac
gtggacatcgcggtgacggccgacgtgcacctcaccctgcgcgggcgcgcgctgccggcg
gctgaccggcgcgtgctggaagccgtggccgggcaggcgctgctcgcgctgcgccagcag
cggatggccacggccgcggcggcggccgagcgcaaggccgaggcgacggagctgcgcacc
acgctgctctcggccgtgggccacgacctgcgcacgccgctcacgtccatcaaggccgcg
atcggcagcctgcgcgcgcccgacctgtcgttgtccgaagaggacaccggcgagctgctg
gaggccatcgagctctcggccgaccggctcgcggggctcatcgacaacctgctcgactcc
tcgcggctggccaccggcgcggtcacgccgcacctgcggccggtgggctacgacgaggtg
ctggcccacgcgttgtccaatgtggacaactcgcgggacgtgaaggtggccgtggacgtg
agcctgccctcggtgctggccgacccgggcctgctggaacgggtgatcgccaacgtgctc
gacaacgccctgcgccacggcggcggtgtggtgtccgcccgcgccagcgcgcactccgag
cacgtggagctgaggatcgtcgaccacgggaagggcctgcgcaagggcacggccgactcg
gcgttcgcgccgttccagcgcctcggcggcgaccgcgactcgactcccggcgtggggttg
ggactttcggtcgcgaagggcttcatcgaggcgatgggcggatccatccgcgccgaggac
acgccgggcggcggactcaccgtggtgatctcgctgcccgcctacaccgggcagaatccg
gacaaggacctgctcaagatcgacgagatcacggacgacgccgtggagggagtgggcacg
tga
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