Amycolatopsis rhabdoformis: VSH64_47440
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Entry
VSH64_47440 CDS
T09694
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arhd03036
]
VSH64_47440 (smc)
Chromosome and associated proteins [BR:
arhd03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
VSH64_47440 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
SMC_hinge
AAA_23
AAA_15
AAA_29
BLOC1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WSE30343
UniProt:
A0ABZ1I7F1
LinkDB
All DBs
Position
10190364..10193969
Genome browser
AA seq
1201 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGTQGAKDLRGGK
MEDVIFAGTAGRAPLGRAEVTLTIDNADGALPIEYTEVSITRRMFRDGASEYEINGDRCR
LMDVQELLSDSGIGREMHVIVGQGQLSAILESKPEERRAFIEEAAGVLKHRKRKEQTLRK
LANMQGNLDRLGDLTTELRRQLKPLGKQAEIARKAQSVQSELRDSRLRLLADDLVTQRES
IAREEADERTARQRRTEVEQALEVVAAEETELEASLAEDAPKLQAAQETWYKLSALAERL
RGTVRLAVERQRHLSSDVAAPTGGRDPEELLAEAEQVAEREQELNEAVMEARELLAETVL
KREDLEQRVQAAERAHWAAVRAIADRREGMAKLTGQVEALRSKNGATADEIDRISVSLQE
SAERAEIALEELEEAKAEGGVEESDDADLMQRHDRAVEANNAAKARVEELVKAERGAERE
IASERARVEALSMGLKRKDGAGALLGASHELPGLLGSVAALLTVQPGHEVALAAALGPVA
DAVAVAGGEQALTALKYLKETDSGRAGILLSGSFGSTVDTGSWPVLPYGARWAREVVQAP
EQLRPAVEQALDKLALVDGLDAARQLVESHPDVRAVTREGDVFGARWVVGGSAARESVIE
VQAAVDEAGERLRTAERALERHTAELEGARAEQQARREEVGQAKDALGDAKVRKARSSER
LNRMQQAARSAQAEVERLSAQRAKVEQSREQALEQLAELEERLSAVAEQPVEDDPDTAER
DEAVAQLAVVRQEEMEARLTQRTAEERARSIAGRAESLRRAARAEQEARDRAAKAREARE
RGASIANAVVNAGELALERIEHSVQRAAAERDDAQAQRQARETALTAVRAKVRELSGELE
KLTDAVHRDEVLRAEQRLRLETLEGKIAEDFGIGLTDLVQEYGPDVPVPPSAGEMAEYEA
AKERGEDVTPPPPMPYDRDTQARRAKRAEKDLTLLGKVNPLALEEFAALEERYKFLSTQL
EDLKDTRKDLEAVIRQVDEKILEVFASAYADVAREFETVFSVLFPGGEGRMVLTQPNDLL
ATGVDVEARPPGKKVKRLSLLSGGEKSLVAVGMLVAIFRARPSPFYVMDEVEAALDDTNM
RRLIGLLEQLRDSSQLIIITHQKPTMEIADALYGVSMQGDGITKVISQRLRAEDEEPVPA
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctgaaaagcttgacgctgaagggtttcaagtccttcgcctcggccaccacgctg
cggttcgaacccgggatcacctgcgtggtgggccccaacggttcgggcaagtcgaacgtg
ctcgacgcgctgcgctgggtcatgggcacccagggcgccaaggacctgcgcggcggcaag
atggaagacgtcatcttcgccggcaccgcgggtcgcgcgccgctgggccgcgccgaggtc
acgctcaccatcgacaacgccgacggcgcgctgccgatcgagtacaccgaggtctccatc
acgcgccgcatgttccgcgacggggccagcgagtacgagatcaacggcgaccgctgccgc
ctgatggacgtgcaggaactgctgtcggactccggtatcggccgcgagatgcacgtgatc
gtggggcagggccagctctcggccatcctcgaatcgaagcccgaggagcgccgcgccttc
atcgaagaggccgcaggcgtgctcaagcaccgcaagcgcaaggaacagaccctgcgcaag
ctcgccaacatgcagggcaacctcgaccgcctcggcgacctcaccaccgagctgcgccgt
cagctcaagccgctgggcaagcaggccgagatcgcgcgcaaggcgcagtcggtgcagtcc
gagctgcgggattcgcgcctgcgcctgctggccgacgacctggtcacccagcgcgagtcc
atcgcgcgcgaggaggccgacgagcgcaccgcccgccagcgccgcaccgaggtggagcag
gcgctggaggtcgtggcggccgaggagaccgagctggaggcctcgctcgccgaggacgcg
ccgaagctgcaggcggcccaggagacctggtacaagctttccgcgctggccgagcgcctg
cgcggcaccgtgcgcctggccgtggagcgccagcgccacctgtcctccgacgtggcggcg
cccaccggcggccgtgacccggaggagctgctggccgaggccgagcaggtcgccgaacgc
gagcaggagctcaacgaggcggtgatggaggcccgcgagctgctggccgagaccgtgctg
aagcgcgaggacctcgaacagcgcgtgcaggccgccgagcgcgcccactgggccgccgtg
cgggccatcgccgaccgccgcgagggcatggcgaagctcaccggccaggtcgaggcgctg
cgcagcaagaacggcgccaccgccgacgagatcgaccgcatctcggtgtcgctgcaggaa
tcggccgagcgtgcggagatcgcgctcgaagagctggaagaggccaaggccgaaggcggc
gtcgaggagtccgacgacgccgacctgatgcagcgccacgaccgcgcggtcgaagccaac
aacgccgccaaggcacgcgtcgaagagctggtgaaggccgagcgcggtgccgaacgcgag
atcgcgtcggagcgggcgcgcgtcgaggcgctgtcgatgggtctcaagcgcaaggacggt
gcgggcgcgctgctcggcgcgtcgcacgagctgccgggcctgctgggttcggtcgccgcg
ctgctcaccgtgcagccgggccacgaggtggcgctggccgccgcgctcgggccggtggcc
gacgccgtggccgtggccggtggcgagcaggcgctcaccgcgctgaagtacttgaaggaa
accgattccggccgtgccggcatcctgctctccggctccttcggctccacagtggacacc
ggctcgtggccggtgctgccctacggcgcgcgctgggcccgcgaggtcgtgcaggcgccg
gagcagctgcgcccggccgtggagcaggcgctggacaagctcgcgctggtcgacggcctc
gacgccgcccggcagctggtggaaagccatccggacgtgcgcgcggtcacgcgcgaaggc
gacgtgttcggcgcccgctgggtcgtcggtggttcggccgcgcgcgagagcgtgatcgag
gtccaggccgccgtcgacgaagccggcgagcggctgcgcacggccgagcgcgcgctggag
cgccacaccgccgagctggagggcgcgcgcgccgagcagcaggcccggcgcgaggaagtg
ggccaggccaaggacgccctcggcgacgcgaaggtgcgcaaggcccgctcgtcggagcgg
ctcaaccggatgcagcaggccgcgcggtcggcgcaggccgaggtcgaacgcctctccgcg
cagcgcgccaaggtggagcagagccgcgagcaggcgctggagcagctggccgagctggag
gaacggctctccgccgtggccgaacaaccggtggaggacgacccggacacggccgagcgc
gacgaggccgtggcccagctcgccgtggtgcgccaggaggaaatggaagcgcgcctcacg
cagcgcacggccgaggaacgcgcccgcagcatcgccgggcgtgccgaatcgctgcgccgc
gccgctcgcgccgagcaggaggcccgcgaccgcgcggccaaggcccgcgaggcccgcgaa
cggggtgcctcgatcgccaacgccgtggtcaacgccggtgagctcgcgctggaacgcatc
gagcactccgtgcagcgcgcggcggccgagcgcgacgacgcgcaggcccagcgccaggcc
cgcgagaccgcgctcaccgcggtgcgcgccaaggtccgcgagctgtccggcgaactcgag
aagctcaccgatgccgtgcaccgcgacgaggtgctgcgcgccgagcagcggctgcggctg
gaaacgctcgaaggcaagatcgccgaggacttcggcatcggcctcacggatctggtgcag
gagtacggccccgacgtgccggtgccgccgagcgccggcgagatggccgagtacgaggcg
gccaaggagcgcggcgaggacgtgaccccgccgccgccgatgccgtacgaccgcgacacg
caggcccgccgcgccaagcgcgcggagaaggacctcacgctcctgggcaaggtcaacccg
ctggcgctggaggagttcgcggcgctggaagagcgctacaagttcctctcgacccagctc
gaggacctcaaggacacgcgcaaggacctcgaagccgtgatccggcaggtcgacgagaag
atcctcgaggtcttcgcctcggcctacgccgacgtggcgcgtgagttcgaaaccgtgttc
agcgtgctgttccccggtggcgagggccggatggtgctcacccagcccaacgacctgctg
gccaccggcgtcgacgtcgaggcgcgtccgccgggcaagaaggtgaagcggctgtcgctg
ctgtccggtggcgagaagtcgctggtggccgtgggcatgctggtggccatcttccgcgcc
cgcccctcaccgttctacgtgatggacgaggtcgaggcggcgctcgacgacaccaacatg
cgccggctgatcgggctgctggagcagctgcgcgactcgtcgcagctgatcatcatcacc
caccagaagccgaccatggagatcgccgacgcgctctacggcgtgagcatgcagggcgac
ggcatcacgaaggtgatctcgcagcgcctgcgcgccgaggacgaagagccggtgcccgcc
gtctga
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