Amycolatopsis rhabdoformis: VSH64_47675
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Entry
VSH64_47675 CDS
T09694
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd02024
Quorum sensing
arhd03060
Protein export
arhd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VSH64_47675 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VSH64_47675 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSH64_47675 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
arhd02044
]
VSH64_47675 (ffh)
Enzymes [BR:
arhd01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
VSH64_47675 (ffh)
Secretion system [BR:
arhd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VSH64_47675 (ffh)
Eukaryotic Sec-SRP protein
VSH64_47675 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
nSTAND3
APS_kinase
TctA
Zeta_toxin
ArsA_ATPase
NTPase_1
MMR_HSR1
AAA_18
nSTAND_NTPase7
NPHP3_N
AAA_30
AAA_31
AAA_26
AAA_16
AAA_33
ParA
Thymidylate_kin
MobB
AAA_17
AAA_24
TsaE
NACHT
AAA
ABC_tran
TetR_C_7
hnRNP_Q_AcD
6PF2K
Motif
Other DBs
NCBI-ProteinID:
WSE30388
UniProt:
A0ABZ1I7J3
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All DBs
Position
10241590..10243137
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AA seq
515 aa
AA seq
DB search
MFDTLSDRLTAALQTLSRKGRLSDADIDATAREIRIALLEADVALPVVKEFITRIKDRAK
GAEVSGALNPAQQVIKIVNEELVGILGGETRRLNLAKNPPSVIMLAGLQGAGKTTLAGKL
AMWLKKQGHAPMLVACDLQRPNAVTQLQVVGERAGVVTFAPEPGNGVGDPVDVARRAIEE
AKRAQHDIVVVDTAGRLGVDEELMKQAADIRDAVQPDEVLFVVDAMIGQDAVTTAEAFRD
GVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDTFHPDRMASRILGMG
DVLTLIEQAEQHFDQDQAEKAAAKLTSGQLTLEDFLEQMLAVRKMGPIGNLLGMLPGAGQ
MKDQLAQVDDKHLDKLQAIIRGMTPAERDDPKMINGSRRLRIANGSGVSVREVNDLVNRF
FEARKMMAQMAGRFGFGGGGGSKTRKGKKGKKGKGRGPTQPKVRGGFPGGMPMLPPGGMP
TGGGGMPDLSQLGGMNDVPGFDPTKFKLPKNPGNN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacaccctctccgatcggctcaccgccgccctgcagacgctgtctcgcaagggc
cggctgtccgacgccgacatcgacgccaccgcgcgcgagatccgcatcgcgctgctggag
gccgacgtcgcgctgccggtggtcaaggagttcatcacccggatcaaggatcgggcgaag
ggcgccgaggtctccggggcgctgaaccccgcgcagcaggtcatcaagatcgtcaacgag
gagctcgtgggcatcctcggcggcgagacgcgccggctgaacctggcgaagaacccgccg
tcggtgatcatgctcgccggcctgcagggcgcaggcaagacgacgctggccggcaagctc
gcgatgtggctgaagaagcagggccacgcgccgatgctggtcgcctgtgacctccagcgg
cccaacgccgtcacgcagctgcaggtcgtgggtgagcgcgcgggcgtggtcacgttcgcg
ccggagccgggcaacggcgtcggcgacccggtggacgtcgcgcgccgggccatcgaagag
gccaagcgcgcgcagcacgacatcgtggtggtcgacaccgccggtcgcctgggtgtcgac
gaagagctgatgaagcaggccgcggacatccgcgacgccgtgcagccggacgaggtcctg
ttcgtcgtcgacgcgatgatcggccaggacgccgtgaccacggccgaggcgttccgcgac
ggcgtgggcttcaccggcgtggtgctcacgaagctcgacggcgacgcccgcggtggtgcc
gccctgtcggtccgtgaggtcaccggccagccgatcctcttcgcgtccaacggcgagaag
ctcgaggacttcgacaccttccaccccgaccggatggcctcgcgcatcctcgggatgggc
gacgtgctcacgctcatcgagcaggccgagcagcacttcgaccaggaccaggccgagaag
gccgcggcgaagctgaccagcggccagctcacgctggaggacttcctcgagcagatgctg
gccgtgcgcaagatgggcccgatcggcaacctgctcggcatgctgccgggcgcgggccag
atgaaggaccagctcgcgcaggtcgacgacaagcacctcgacaagctgcaggcgatcatc
cgcggcatgaccccggccgagcgcgatgacccgaagatgatcaacggctcgcgccggctg
cgcatcgccaacggctcgggcgtcagcgtccgcgaggtcaacgacctggtcaaccgcttc
ttcgaggcccgcaagatgatggcgcagatggccgggcgcttcggcttcggtggcggaggc
ggcagcaagacgcgcaagggcaagaaggggaagaagggcaaggggcgcggccccacacag
cccaaggtccgcggcggcttccccggcggcatgccgatgctgcccccgggtggcatgccc
accggcggtggcgggatgcccgacctctcgcagctcggcggcatgaacgacgtgccgggc
ttcgacccgacgaagttcaagctgccgaagaacccgggcaacaattga
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