Amycolatopsis rhabdoformis: VSH64_48160
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Entry
VSH64_48160 CDS
T09694
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VSH64_48160
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
arhd01007
]
VSH64_48160
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arhd03016
]
VSH64_48160
Enzymes [BR:
arhd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
VSH64_48160
Amino acid related enzymes [BR:
arhd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VSH64_48160
Transfer RNA biogenesis [BR:
arhd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VSH64_48160
Prokaryotic type
VSH64_48160
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_edit
Motif
Other DBs
NCBI-ProteinID:
WSE30484
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All DBs
Position
10341159..10342907
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AA seq
582 aa
AA seq
DB search
MITRMSSLFLRTLREDPADAEVPSHRLLVRAGYVRRVAPGGYSWLPLGLRVLRKIEQVVR
EEMNAIGAQEIQFPALLPREPYEITGRWTEYGDGLFRLKDRKGADYLLGPTHEELFALTV
KGEFSSYKDYPVTLYQIQTKYRDEARPRAGILRGREFVMKDSYSFDLDDEGLERSYQAHR
AAYTSLFDRLGLEYVVVAATSGAMGGSASEEFLAVAETGEDTYVRSTESGYAANVEAVIT
PAPPAREIEGLPAAQVHPTPNTPTIESLVAFFNAAGLGREFTAADTLKNVLLKVRQPGTK
EWELLGIGLPGDREVDMKRLEAALEPAEVELLEEADFRKNPFLVKGYIGPKALKDNGVRY
LVDPRVVTGTAWLTGADRDGHHVLDLVAGRDFTPDGTIEAAEVREGDASPDGQGTLVAAR
GIEIGHIFQLGRKYTDAFEVDALGPDSKPIRITMGSYGVGVSRLVAVLAEQNHDKDGLVW
PREVSPYDVHVVVAGKDESIAAGAEKLVAELDAAGVEVLFDDRKATPGVKFADAELVGVP
TILVVGRGLANGVVEVKDRRTGDREEIPVESVVGHLVKLVRS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaccaggatgtcgtcgttgttcctccgcaccctgcgcgaggacccggcggacgcc
gaggtacccagccaccggctgctggtacgcgccggctacgtccgccgggtcgccccgggt
ggttactcgtggttgccgctcgggctgcgcgtgctgcgcaagatcgagcaggtcgtgcgc
gaggagatgaacgcgatcggcgcgcaggagatccagttccccgcgctgctgccgcgcgag
ccgtacgagatcaccggtcgctggacggagtacggcgacggcctgttccgcctcaaggac
cgcaagggtgccgactacctgctgggccccacgcacgaggagctcttcgcgctcaccgtg
aagggcgagttcagctcgtacaaggactacccggtcacgctctaccagatccagaccaag
taccgcgacgaagcgcgcccccgcgcgggcatcctgcgcggccgtgagttcgtgatgaag
gactcctactccttcgacctcgacgacgagggcctggagcgctcgtaccaggcccaccgc
gccgcctacaccagcctcttcgaccgcctcggcctcgagtacgtggtggtcgccgccacg
tcgggcgccatgggcggctcggcgtcggaggagttcctcgccgtcgccgagacgggtgag
gacacctacgtgcgcagcacggagtccggttacgccgccaacgtcgaagccgtgatcacg
cccgcgccgccggcgcgcgaaatcgagggcctgcccgccgcgcaggtgcaccccaccccg
aacacgccgaccatcgagtcgctcgtggcgttcttcaacgccgccggcctcggccgcgag
ttcaccgcggccgacacgctgaagaacgtgctgctgaaggtccgccagccgggcaccaag
gagtgggagctgctgggcatcggcctgccgggcgaccgcgaggtggacatgaagcgcctc
gaagcggcgctcgagcccgccgaggtcgagctgctggaggaagcggacttcaggaagaac
ccgttcctcgtgaaggggtacatcggcccgaaggcgctgaaggacaacggtgtgcgctac
ctggtcgacccgcgggtggtcaccggcaccgcttggctgaccggcgccgaccgggacggg
caccacgtgctcgacctcgtggccggccgcgacttcacccccgacggcacgatcgaggcc
gccgaggtccgcgagggcgacgcctcgcccgacggccagggcaccctcgtcgccgcgcgc
ggcatcgagatcggccacatcttccagctgggccgcaagtacaccgacgccttcgaggtc
gacgccctcggccccgactcgaagcccatccgcatcacgatgggttcctacggcgtcggc
gtctcgcgcctggtcgccgtgctcgccgagcagaaccacgacaaggacggcctcgtgtgg
ccgcgtgaggtctcgccgtacgacgtgcacgtggtcgtggcgggcaaggacgagagcatc
gccgcgggtgcggagaagctcgtcgcggagctcgacgccgccggtgtcgaggtgttgttc
gacgaccgcaaggccaccccgggcgtgaagttcgccgacgcggagctggtgggcgtgccc
acgatcctcgtggtcgggcgcggcctggccaacggcgtggtcgaggtcaaggaccgccgc
accggcgaccgcgaggagatcccggtcgagtcggtcgtcggtcacctggtcaagctcgtc
cgctcctga
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