Amycolatopsis rhizosphaerihabitans: AB5I40_02990
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Entry
AB5I40_02990 CDS
T11563
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
arhi Amycolatopsis rhizosphaerihabitans
Pathway
arhi00020
Citrate cycle (TCA cycle)
arhi00190
Oxidative phosphorylation
arhi00650
Butanoate metabolism
arhi00720
Other carbon fixation pathways
arhi01100
Metabolic pathways
arhi01110
Biosynthesis of secondary metabolites
arhi01120
Microbial metabolism in diverse environments
arhi01200
Carbon metabolism
Module
arhi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
arhi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
arhi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AB5I40_02990
00650 Butanoate metabolism
AB5I40_02990
09102 Energy metabolism
00190 Oxidative phosphorylation
AB5I40_02990
00720 Other carbon fixation pathways
AB5I40_02990
Enzymes [BR:
arhi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AB5I40_02990
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
NAD_binding_8
GIDA
Motif
Other DBs
NCBI-ProteinID:
XEM72125
LinkDB
All DBs
Position
complement(713012..714940)
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AA seq
642 aa
AA seq
DB search
MSDYTVGEPIADTRAPDGPIEDRWDSRRFGAKLVNPANRRRHRIIVVGTGLAGASAGATL
AEQGYHVVQFCFQDSPRRAHSVAAQGGINAAKNYRNDGDSVYRLFYDTVKGGDFRSRESN
VYRLAQVSTQIIDQAVAQGVPFAREYGGLLDTRSFGGVQVQRTFYARGQTGQQLLLGAYQ
ALARQIDAGGVEMHPRTEMLDLIVSDGKARGIVARDLVTGEVTTHLADAVVLATGGYGNV
FYLSTNAKGSNTTAIWRAHKRGAYFANPCFTQIHPTCIPRSGEHQSKLTLMSESLRNDGR
IWVPKQPRDPRPPQDIPEEERDYYLERMYPSFGNLVPRDIASRAAKNVCDAGFGVGPGGL
GVYLDFADAIERMGRPAVEAKYGNLFDMYERITAENPYEVPMRIYPAIHYTMGGLWVDYD
LQSTVPGLFVIGEANFSDHGANRLGASALMQGLADGYFVLPATLNDYIARGSFPALDPAD
PDVAQAETAVRDRLERLLSVRGTRSVDSFHRELGHLMWDHCGMSRSAEGLRKALDRIPEL
RAEFWRDVRVPGTGAELNQELEKAGRVADFLELAELLLLDALVREESCGGHFREEHQTED
GEAQRDDERFSYVSAWEYGEKPVLHQEILNFEHVHPTQRSYT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactacacggtcggcgagccgatcgccgacacccgggcgccggacggcccgatc
gaggaccgctgggacagccgccgcttcggcgcgaagctggtcaacccggccaaccggcgg
cggcaccggatcatcgtggtcggcaccggtctcgcgggcgcgtccgccggggcgacgctc
gccgaacagggctaccacgtggtccagttctgcttccaggactcgccgcggcgcgcgcac
tcggtcgccgcgcagggcggcatcaacgcggcgaagaactaccgcaacgacggcgattcg
gtctaccgcctcttctacgacacggtgaagggcggcgacttccggtcccgggagtccaat
gtgtaccggctggcgcaggtgtccacgcagatcatcgaccaggcggtggcgcagggcgtg
ccgttcgcccgggagtacggcgggctgctcgacacccgctcgttcggcggtgtgcaggtg
cagcgcacgttctacgcgcgcggccagaccggtcagcagctgctgctcggcgcgtaccag
gcgctggcccggcagatcgacgccggcggcgtggaaatgcacccgcgaacggagatgctg
gacctgatcgtgtccgacggcaaggcgcgtgggatcgtcgcgcgggacctggtgaccggc
gaggtgacgacgcatctcgcggacgccgtcgtgctcgcgaccggtggctacggcaacgtc
ttctacctgtccaccaacgcgaagggctccaacaccaccgcgatctggcgggcgcacaag
cgcggcgcgtacttcgcgaacccgtgcttcacgcagatccacccgacctgtatcccgcgg
tccggcgaacaccagtcgaagctgacgctgatgagcgaatcgctgcgcaacgacggccgg
atctgggttccgaagcagccgcgcgaccctcggccgccgcaggacatcccggaggaagag
cgggattactacctcgagcggatgtacccgagcttcggcaacctggtgccgcgcgacatc
gcctcgcgggccgctaaaaacgtctgcgacgccgggttcggcgtcggccccggcgggctc
ggcgtgtacctcgacttcgcggacgcgatcgagcggatgggccgtccggcggtggaagcc
aagtacggcaaccttttcgacatgtacgagcggatcaccgcggagaacccgtacgaggtc
ccgatgcggatctacccggcgatccactacacgatgggcggtctgtgggtcgactacgac
ctgcagagcaccgtgcccggcctgttcgtgatcggcgaggcgaacttctccgaccacggc
gcgaaccggctcggcgcgtccgcgctgatgcagggcctcgccgacggctatttcgtgctc
ccggccaccctcaacgactacatcgcccgcggcagcttccccgcgctcgacccggcggat
ccggacgtcgcgcaagcggaaaccgccgtgcgcgaccggctcgaacggctgctgtcggtg
cgcggcacccgcagcgtggactcgttccaccgcgagctgggccacctcatgtgggaccac
tgcgggatgtcccgctccgccgagggcctgcggaaagcactcgaccggattccggaattg
cgggcggaattctggcgcgacgtccgcgtcccgggcaccggggcggagctgaaccaggaa
ctggagaaggccggtcgcgtcgccgatttcctcgaactcgccgagctgttgctcctcgac
gccctggtgcgcgaggaatcgtgcggcggccatttccgcgaggaacaccagaccgaagac
ggcgaagcccagcgcgacgacgagcggttctcctacgtctcggcctgggaatacggcgag
aagccggtgctgcaccaggaaatcctgaacttcgagcacgtccaccccacccagcggagc
tacacgtga
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