Amycolatopsis rhizosphaerihabitans: AB5I40_13010
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Entry
AB5I40_13010 CDS
T11563
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
arhi Amycolatopsis rhizosphaerihabitans
Pathway
arhi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB5I40_13010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arhi03400
]
AB5I40_13010
Enzymes [BR:
arhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AB5I40_13010
DNA repair and recombination proteins [BR:
arhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AB5I40_13010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XEM74030
LinkDB
All DBs
Position
2896507..2897304
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AA seq
265 aa
AA seq
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MTVRVATWNVNSIVPRLPRVLDWLDRTAPDVLCLQELKNTTEAFPADEITARGYEVAAYG
LGRWNGVAILSKIGLDDVVRGLPGEPGFDGQAEARAIGATCGGIRIWSVYVPNGREPENP
HYAYKLEWFEKLSDLVGEELQHARPFAVMGDFNVAPTDQDVWDISVFAESTHVTEPERAA
LKKLRDAGLSDVFPRPLKYDHPFTYWDYRAGNFPNNKGMRIDLVYGNEVFAKAVTDSYVD
REARKGKGPSDHAPIVVDLELDPER
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccgcgtcgccacctggaacgtcaattccatcgttccccggctgcctcgcgtg
ctcgactggctcgaccgcaccgcgccggacgtgctctgcctgcaggaactcaagaacacc
accgaagccttccccgccgacgagatcaccgcgcgcgggtacgaggtcgccgcctacggg
ctcgggcggtggaacggcgtcgcgatcctctcgaagatcgggctcgacgacgtggtgcgc
gggctgccgggcgaaccgggcttcgacgggcaggccgaggcgcgcgcgatcggcgcgacg
tgcggtgggatccgcatctggtcggtgtacgtgccgaacgggcgcgagccggaaaacccg
cactacgcctacaaactcgagtggttcgagaagctcagcgatctggtcggcgaagagctg
cagcacgcgcgtccgttcgcggtgatgggcgacttcaacgttgcgccaacggatcaggac
gtctgggacatctcggttttcgccgagtccacgcacgtcaccgagcccgaacgggcagcg
ctgaagaagctccgcgacgcgggactgtccgacgttttcccgcggccgctgaagtacgac
cacccgttcacgtactgggactaccgcgccgggaacttccccaacaacaagggaatgcgc
atcgacctcgtctacgggaacgaggttttcgccaaggcggtcaccgattcctacgtggac
cgcgaggcccgcaagggcaaggggccgtccgaccacgcgccgatcgtcgtggatctggag
ctggatccggagcggtaa
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