Amycolatopsis rhizosphaerihabitans: AB5I40_17720
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Entry
AB5I40_17720 CDS
T11563
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
arhi Amycolatopsis rhizosphaerihabitans
Pathway
arhi00470
D-Amino acid metabolism
arhi00550
Peptidoglycan biosynthesis
arhi01100
Metabolic pathways
arhi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB5I40_17720
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB5I40_17720
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AB5I40_17720
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
arhi01011
]
AB5I40_17720
Enzymes [BR:
arhi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AB5I40_17720
Peptidoglycan biosynthesis and degradation proteins [BR:
arhi01011
]
Precursor biosynthesis
Amino acid ligase
AB5I40_17720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
XEM74922
LinkDB
All DBs
Position
complement(3887359..3888456)
Genome browser
AA seq
365 aa
AA seq
DB search
MSAEKIRVAVVFGGRSSEHTISCLSAGSVISNLDPDRFEVLPVGVTPSGGWVLGTGDPKQ
LSIQGRELPTVESGRALVLAGDPTSRELRTVDPGQATEVLGTVDVVFPVLHGAFGEDGTI
QGLLELADIPYVGPGVLASAAAMDKEYAKKLLAAEGLPVGTYAALRRGQSTLAEQDRERL
GLPVFVKPSRAGSSVGISRVADWADLDAAIELARRTDPKVLVEAAVRGREVECGVLEFPD
GRVEASLPAEIRVLAEGEDAWYDFETKYLGEDAELDIPAKLDDALTDRLRAMAVEAFRAL
DCQGLARVDFFVTEEGDLVINEVNTMPGFTTKSAYPKMWEVTGVDYPTLLSTLIDTALAR
GTGLR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgaaaagatccgggtcgcggtcgtgttcggtggccgcagcagcgagcacacc
atttcgtgcctgtccgcgggcagtgtgatctcgaacctggatccggaccgcttcgaggtg
ctcccggtcggggtcacgccgagcggcggctgggtgctcggcaccggcgacccgaagcag
ctcagcatccagggccgcgagctgccgacggtcgagtccggccgcgcgctcgtgctcgcc
ggcgatccgaccagccgcgagctgcgcacggtcgacccgggccaggccaccgaggtgctc
ggtactgtcgacgtcgtcttcccggtgctgcacggcgccttcggcgaggacggcaccatc
cagggcctgctcgaactcgccgacatcccgtacgtcggccccggcgtgctcgccagcgcg
gcggcgatggacaaggaatacgcgaagaagctcctcgccgcggaggggctgccggtcggc
acctacgccgcgctgcgccgcggacagtccactttggccgaacaggaccgcgaacgcctt
ggcctgccggtgttcgtgaagccctcgcgcgccggttcgtcggtcggcatctcccgcgtc
gccgactgggccgacctggacgccgcgatcgaattggcccggcgcaccgacccgaaggtg
ctcgtcgaggcggcggtgcgcgggcgcgaggtcgaatgcggcgtgctggaattcccggac
ggccgcgtcgaggcgtcgctgccggccgagatccgggtgctcgccgagggcgaggacgcc
tggtacgacttcgaaaccaagtacctcggcgaggacgccgagctggacatcccggccaaa
ctggacgacgcgctcaccgaccggctgcgcgcgatggccgtcgaggcgttccgcgcgctc
gactgccagggcctggcccgcgtcgacttcttcgtgaccgaggagggcgacctggtgatc
aacgaggtcaacacgatgcccggcttcaccacgaagtccgcctacccgaagatgtgggag
gtgaccggggtggattacccgacgctgctgtcgacgctgatcgacaccgcgctcgcccgg
ggcaccggcctgcgctga
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