Amycolatopsis rhizosphaerihabitans: AB5I40_19930
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Entry
AB5I40_19930 CDS
T11563
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
arhi Amycolatopsis rhizosphaerihabitans
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arhi03032
]
AB5I40_19930
03400 DNA repair and recombination proteins [BR:
arhi03400
]
AB5I40_19930
Enzymes [BR:
arhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AB5I40_19930
DNA replication proteins [BR:
arhi03032
]
Prokaryotic type
DNA Topoisomerases
AB5I40_19930
DNA repair and recombination proteins [BR:
arhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB5I40_19930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HALZ
Motif
Other DBs
NCBI-ProteinID:
XEM75347
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Position
4364099..4366588
Genome browser
AA seq
829 aa
AA seq
DB search
MARRSKTPVTRVDPSAFDSPGAQVFDNPLKTEIEDSYLEYAYSVIHSRALPDARDGLKPV
HRRILFSMNENGYRPTHAYVKSSRVVGDVMGKYHPHGDVAIYDAMVRLAQDFSMNAPLID
GHGNFGSPDDGPAASRYTEARMSNEAMLLVGELGEDTVDFRPNYDGSLEEPSVLPAAYPN
LLVNGTSGIAVGMATNMIPHNLGEVIGAARWLINHPNATLDKLMEYVPGPDLPTGGSLLG
LDEVRKAYETGRGVVRMRANVETGPLEGSRGRQAITVTELPYGVGPEKVIEKITDEVNKS
KRLTGIADVKDLTDRENGTRLVIECKVGVNPQALLADLYRLTPLEQSFGINNLVLVDGQP
QTLGLKALLEVFLRHRYEVVTRRTRYRRRKREERLHLVDGLLVALLNIDKVIRLIRESEN
AAAAKDGLMTKFKLSEIQATYILDTPLRRLTKYDRLELENEQEKLRAEIAELTTILEDES
VLKKLVSTELAKIAKDFPTERRTRLIDGDLKEVLAASKPSGPLEVADDPCQVILSATGLV
ARTAAESEEASEVRRRNGRVKHDAVSAVVHTTARGQVLLVTSRGRAFKTDVLPLPVLPEQ
AGTVSLRGGMAAKELVPLEKGERVVGIAPLGEQAGDSPGLAIGTRAGVVKVCAPDWPVRS
DEFEIITLKAGDEVVGATWLTDGNETLAFVSSDSSLLRFAASLIRPQGTKSGGMAGVKLS
ANANAVFFGAIRTDDEEHGEPMVVTATGQSVKVTPFSEYPAKGRATGGVRTHRFLKGETQ
VQVAWIGPRPAGASRTGDPVELPEIDLRRDGSGHAHPGPEVVGHLIERG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgtagcaagaccccggtgacccgggtcgacccgagcgcgttcgactcgccg
ggcgcgcaggtcttcgacaacccgctgaagacggagatcgaagactcgtacctggaatac
gcgtactcggtgatccactcgcgcgccctcccggacgcgcgagacggcctgaagccggtg
caccgccggatcctgttctcgatgaacgagaacggctaccgcccgacgcacgcgtacgtg
aaatcgtcacgcgtggtcggcgacgtcatgggcaagtaccacccgcacggcgacgtggcg
atctacgacgcgatggtccggctggcgcaggacttctcgatgaacgccccgctgatcgac
gggcacggaaacttcggttccccggacgacggaccggccgcctcgcgatacaccgaagcc
cggatgtcgaacgaagcgatgctgctcgtcggcgaactcggcgaagacaccgtcgacttc
cgcccgaactacgacggttcgctcgaagagccttcggtgctccccgccgcatacccgaac
ctgctggtcaacggcacgtccgggatcgcggtcggcatggcgaccaacatgatcccgcac
aacctcggcgaggtgatcggcgccgcgcggtggctgatcaaccatccgaacgccacgctc
gacaagctgatggagtacgtccccggccccgacctgcccaccggcggcagcctgctgggc
ctggacgaggtccgcaaggcctacgaaaccggccgcggcgtggtccggatgcgcgcgaac
gtcgaaaccggcccgctggaaggcagccgcggacggcaggccatcacggtcaccgagctg
ccgtacggcgtcggcccggagaaggtgatcgaaaagatcaccgacgaggtcaacaagtcc
aagcggctcaccggaatcgcggacgtcaaggacctcaccgaccgcgagaacggcacgcgg
ctcgtcatcgagtgcaaggtgggcgtcaacccgcaggcgctgctggcggacttgtatcgc
ctcacgccgctggagcagtcgttcggcatcaacaacctcgtgctcgtcgacggacagccg
cagacgctcggcctgaaggcgctgctggaggtcttcctgcggcaccgctacgaggtcgtc
acgcggcgcacgcgctaccgccgccgcaagcgcgaagagcgcctgcacctggtcgacggt
ctgctggtcgcgctgctgaacatcgacaaggtcatccggctgatccgcgaaagcgaaaac
gcggccgccgcgaaggacggcctgatgacgaagttcaagctgtccgaaatccaggcgacc
tacatcctcgacactcccctgcgccgcctgacgaagtacgaccggctggaactggaaaac
gagcaggaaaagctgcgcgccgagatcgccgagctgaccacgatcctcgaggacgagtcg
gtgctgaagaagctcgtctcgacggaactggcgaagatcgccaaggacttccccaccgaa
cgccgcacccgcctcatcgacggcgacctgaaggaagttctggccgcctcgaagccgtcc
ggcccgctggaggtcgccgacgacccgtgccaggtgatcctgtcggccaccggcctggtc
gcccgcaccgcagcggaatccgaagaggcgtcggaagtccgccgccgcaacggccgcgta
aaacacgatgccgtatcggccgtcgtacacaccaccgcgcgcggccaagtgctgctggtg
acaagccgaggccgcgccttcaagaccgatgtcctgccgctccccgtactcccagaacaa
gcaggcacagtgtcgttgcggggcggcatggcagcaaaagagctggtaccactcgaaaag
ggcgaacgggtcgtaggcatcgcccctctcggcgaacaagcaggagactcgccgggcttg
gccatcggcacccgcgccggcgtggtgaaggtctgcgcgccagactggccagtccggtcg
gacgaattcgagatcatcaccctcaaggcaggcgacgaggtcgtaggcgcgacctggctg
acggacggaaacgaaacactggccttcgtctcgtcggactcgtcactgctgcgcttcgcc
gccagcctgatccgcccgcaaggcaccaagagcggcggcatggcaggagtgaaactgtcc
gcgaacgcgaacgcggtcttcttcggagcaatccgcaccgacgacgaagaacacggcgaa
ccgatggtggtgacggcaacgggccagagcgtgaaggtcacgcccttcagcgaatacccg
gcaaagggccgagccaccggcggcgtgcgaacccaccggttcctcaagggagaaacccaa
gtccaggtcgcgtggatcggcccccgcccagcaggcgcgagccgcaccggagaccccgtg
gaactccccgagatcgacctccgccgcgacggctcaggccacgcccaccccggcccggaa
gtggtgggccacctcatcgaacgcggctag
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