Amycolatopsis rhizosphaerihabitans: AB5I40_20650
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Entry
AB5I40_20650 CDS
T11563
Symbol
lysX
Name
(GenBank) bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
arhi Amycolatopsis rhizosphaerihabitans
Pathway
arhi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AB5I40_20650 (lysX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
arhi01007
]
AB5I40_20650 (lysX)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arhi03016
]
AB5I40_20650 (lysX)
Enzymes [BR:
arhi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
AB5I40_20650 (lysX)
Amino acid related enzymes [BR:
arhi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AB5I40_20650 (lysX)
Transfer RNA biogenesis [BR:
arhi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AB5I40_20650 (lysX)
Prokaryotic type
Other AARSs
AB5I40_20650 (lysX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
XEM75479
LinkDB
All DBs
Position
complement(4519664..4522987)
Genome browser
AA seq
1107 aa
AA seq
DB search
MGTPVSARPRSLGWKARAGGLVATVVQLAAIFSIVLLLAGGRHGHLLNGIDMAFGAVSVP
TSSSLVIVLLLVVLGAALRRRKKAALYVLVLFQVAGLVTTLVLQALLLWAPDLLTLTARQ
MRHIPTQVGALAVADAISVLLIVFLLSLRPAFPARLAPGAWWNGLSVLFIGFLAVIVCGW
ALTEVFPGSLGDAWERFAWVVNHATGENLQLRRIGVGEGPAWIDVVLDLGATFVSTAALY
TLFRGVRSRRIRTDDEELQLRRLLGEFGEDDSLGYFATRRDKSVMFAPNGRAAVTYRVLA
GTTVASADPIGDPDAWPDAVQAWLHEARTYGWTPGVLGASEKGAKVYAAAGLRALQIGDE
AVLDVREFSLTGPERKSVRQAVKRIQRAGYTAQVRRHSEIPEDEMVQLLARAQQWRVDET
ERGFSMALGRLGDPSDGRSVMVEAYDARGELRGLLSFVPWGRRGLSLDLMRRDRDAENGL
NEFMVAEVVAAAQHVGAQRISLNFAMFRAVFSEGERIGAGPVLRAWRAVLGLASRFFQLE
SLYRSNAKYGPEWEPRFLCYSSARRLPRVGIVAGALEGFVPTGRARSLRLENVGEDFVAQ
VRRIDEEAAQVVPRPKRRPEQVRVRVAKVDKLRELGVDPYPVGFSREDHLGDIVHTFSGL
EPDSHTGKRVRVAGRVLALRTLGGLCFARIKDFSGELQLMLDAKVLDLTGWRTGVDLGDH
VGVSGEVITSRRGELSVLVDEWTVTAKCLHPLPDKRKGLTDPETRVRQRYLDLAVNPDSA
NMLRLRSTVVRAVRERLHQGDFLEVETPMLQTIHGGANARPFVTHINAYDMRMYLRIAPE
LYLKRLCVAGVERVFELNRNFRNEGVDATHNPEFTMLEAYQAYADYNAMRHLMRDLIQHA
AEAAYGAQIVRRPDANGRVVEHDISGDWPVIPVHKAVSDALGEEIDSHTPIATLRKLCAA
AGVPVPEEASAGDLVLKAHEHLVEGSTVLPTFYTDYPTEVSPLTRQHRTDPLLAERWDLI
AFGSEVGTAYTELTDPLEQRRRLEAQSLRAASGDVEAMELDEDFLLALEHGMPPTGGLGL
GVDRLLMMLSGTSIRQTVLFPFVRPQG
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccccagtgagcgcccgcccgcgcagccttggctggaaggcgcgcgccggcggt
ctcgtggccactgtcgtgcagctcgcggcgatcttttcgatcgtgctgctgctcgccggc
ggacggcacgggcacctgctgaacggcatcgacatggcgttcggcgcggtgagcgtgccg
accagttcgagcctggtgatcgtgctgctgctggtcgtgctcggcgcggcgctgcgcagg
cgcaagaaggccgcgctgtacgtgctcgtgctgttccaggtcgcgggcctggtcaccacg
ctggtcctgcaggcgctgctgctgtgggctcccgacctgctgactctcaccgcccggcag
atgcggcacatcccgacgcaggtgggcgcgctcgcggtggccgacgccatctcggtcctg
ctgatcgtgttcctgctgtcgctgcggcccgcgttccccgcgcggctcgcccccggtgcc
tggtggaacggcctttccgtgctgttcatcgggttcctcgcggtgatcgtgtgcggctgg
gcactcaccgaggtattcccgggcagccttggcgacgcgtgggagcggttcgcctgggtg
gtcaaccacgcgaccggcgagaacttgcagttgcgccgcatcggcgtcggcgaaggcccg
gcgtggatcgacgtcgtcctcgacctcggcgcgaccttcgtgtctactgccgcgctgtac
acgctcttccgtggcgtacgcagccgtcgcattcggacagacgacgaagaactgcagctg
cgccgtctgctgggcgagttcggcgaagacgactctctcggttacttcgccacgcgtcgc
gacaagagcgtcatgttcgcgcccaacggccgcgccgcagtgacgtaccgcgtgctcgcc
ggcaccacagtcgcaagcgcggacccgatcggtgaccccgacgcgtggccggacgcggtg
caggcgtggctccacgaagcgcgtacgtacggctggacgccaggcgtgctcggcgcgagc
gagaagggcgcgaaggtgtacgccgcggcagggctgcgcgcgctgcagatcggcgacgaa
gcggtcctcgacgtccgagagttctcgcttaccgggcctgagcgaaagtccgtgcgacag
gcggtgaagcggattcagcgcgccgggtacaccgcgcaggtccgtcgacacagcgagatc
cccgaagacgagatggtgcagctgctggcacgcgcgcagcagtggcgcgtcgacgagacc
gagcgcggcttctcgatggcgctcggccgtctcggcgacccgagcgacggccgcagcgtg
atggtcgaggcgtacgacgcgcgcggcgaactgcgcggcctgctgtcgttcgtgccgtgg
ggccgacggggcctctcgctcgacttgatgcgccgtgaccgggacgccgaaaacgggctc
aacgagttcatggtcgccgaggtcgtcgcggccgcgcagcacgtcggcgcgcagcggatc
tcgctgaacttcgcgatgttccgcgcggtgttctccgaaggcgagcgcatcggcgccggg
ccggtgctgcgcgcgtggcgcgcggtgctcggcctcgcgtcgcggttcttccagctggaa
tcgctgtaccggtccaacgccaagtacggcccggagtgggaaccgcggttcctctgctac
tcctcggcgcgacggctcccgcgggtcggcatcgtcgcgggcgcgctggagggcttcgtg
cccaccggacgcgcgcgttcgctgcggctggagaacgtgggggaggacttcgtcgcgcag
gtccggcgcatcgacgaggaagcggcgcaggtcgtgccgcggcccaagcggcgtccggaa
caggtgcgcgtgcgagtggccaaagtggacaaactgcgggagctcggggtggatccgtac
cccgtcggcttctcccgcgaagaccacctcggcgacatcgtgcacacgttttccggactg
gaacccgattcccacaccggaaaacgcgtccgggtagccgggcgagtgctcgccctgcgc
accctcggcggcctgtgtttcgcgcggatcaaggacttctccggcgaactgcagctgatg
ctcgacgcgaaggtcctcgacctgaccgggtggcgaaccggcgtagacctgggcgaccac
gtcggcgtgagcggcgaggtgatcacgtcccgccggggcgagctgtccgtgctcgtggac
gagtggactgtcaccgcgaagtgcctgcatccgttgccggacaagcgaaagggcctcacc
gacccggagacgcgagtccgccagcgttacctggaccttgcggtcaaccctgactccgcg
aacatgctccgcctgcgctcgacggtcgtccgtgccgtccgcgaacgcctccaccaaggc
gacttcctcgaagtcgaaaccccgatgctgcagaccatccacggtggcgccaacgcgcgg
ccgttcgtcacgcacatcaacgcgtacgacatgcggatgtatctgcggatcgctccggag
ctttacctgaagcgcctgtgcgtggccggcgttgagcgggtcttcgagctgaaccggaac
ttccggaacgagggcgtggacgcgacccacaacccggaattcacgatgctggaggcgtac
caggcgtacgcggactacaacgccatgcgccacctgatgcgcgacctgatccagcacgcc
gccgaagccgcgtacggcgcacagatcgtgcgacgccccgacgccaacggccgcgtcgtc
gaacacgacatctccggcgactggccggtgatccccgtgcataaggccgtgtcggacgct
ctaggcgaggaaatcgactcccacacgcccatcgccactttgcggaagctgtgcgccgcc
gccggagtcccggtgccggaggaagccagcgcgggcgacctggtgctgaaggcacacgag
cacctggtggagggttcgacggtcctgccgaccttctacacggactacccgaccgaggtc
tccccgctgacccgccagcaccgcacggacccgctcctggccgaacgctgggacctgatc
gcgttcggttcggaagtcgggaccgcgtacacggagctgaccgacccgctagagcagcgt
cgccgcttggaggcacagtcgttgcgcgcggcgagcggcgatgtcgaggcgatggagctg
gacgaggacttcctgctggcactggaacacggaatgccgccgaccggcgggctggggctc
ggggtggaccggctgctgatgatgctgagcggaacgtccattcggcagacggtgcttttc
ccgttcgtccgtccgcaggggtga
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