Amycolatopsis rhizosphaerihabitans: AB5I40_20700
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Entry
AB5I40_20700 CDS
T11563
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
arhi Amycolatopsis rhizosphaerihabitans
Pathway
arhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB5I40_20700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arhi02000
]
AB5I40_20700
Transporters [BR:
arhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AB5I40_20700
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_11
AAA_22
AAA_16
AAA
AAA_29
AAA_30
nSTAND_NTPase5
DUF4478
AAA_23
ORC-CDC6-like
HAT_Syf1_M
Motif
Other DBs
NCBI-ProteinID:
XEM75489
LinkDB
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Position
complement(4532131..4533207)
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AA seq
358 aa
AA seq
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MPHQAPAETRPPGRRPQSAQPAIRLTGLEKHFDKVRAVDGVDLDIPPGEFFSMLGPSGSG
KTTVLRMIAGFELPTAGTIELEGKDVSQLAPFDRDVNTVFQDYALFPHMTVQQNVEYGLK
VKRVGKAERRDRAKEALRTVRLEDFGDRKPSQMSGGQRQRVALARALVNHPKVLLLDEPL
GALDLKLRQTMQVELKQIQREVGITFVFVTHDQDEALTMSDRIAVFNAGRIEQVGTPVEI
YERPASAFVAGFVGTSNLLSGRSAEAVIGRPGVYSIRPEKIRIDGDLASPAGPGETSATG
SVTDVVYAGSTVRYAVALDAGGQLSVVRQNTSEPTEFADGRVRLRWRREHSFRVPEAG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgccccatcaagcccccgccgagacccggccgccgggaaggcgtccgcagtccgcgcag
ccggcgatccggctcaccggactggaaaagcacttcgacaaggtgcgtgccgtggacggg
gtcgacctcgacatcccgcccggcgagttcttctcgatgctcggcccgtccggttccggc
aagaccaccgtgctgcggatgatcgccggattcgaactgcccaccgcgggcacgatcgaa
ctcgaaggcaaggacgtgagccaactggctccgttcgaccgcgacgtcaacacggttttc
caggactacgcgctcttcccgcacatgacggtgcagcagaacgtggagtacgggctgaaa
gtcaagcgggtcgggaaagccgaacgccgggaccgggcgaaggaagcgctccgcacggtg
cggctggaggacttcggcgaccgcaagccgtcgcagatgtccggtggacagcgacagcgc
gtcgcgctcgcccgcgctctcgtaaatcacccgaaagtgttgcttttggatgaacccctt
ggcgcacttgacctgaagctgcgccaaaccatgcaggtcgagctcaagcagatccagcgc
gaggtcggcatcaccttcgtcttcgtcacccacgaccaggacgaggcgctcaccatgagc
gaccggatcgccgtgttcaacgcgggccgcatcgaacaggtcggtactccggtcgagatt
tacgaacgcccggcaagtgctttcgtagcagggtttgtcggcacgtcgaacctgctcagc
ggccgtagcgccgaggcggtgatcggcaggccgggcgtctacagcatccggccggagaag
atccgcatcgacggagaccttgcgtctccggccggtcccggagagacttctgcgaccggt
tcggtcacggatgtcgtttatgccggttcgacggtgcgctacgctgtcgcgctcgatgcc
gggggccaattgtccgttgtccgccagaacaccagcgagccgaccgagttcgccgacggt
cgcgtccgcctgcgctggcgccgcgaacacagtttccgggtccccgaagccggctag
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