Amycolatopsis rhizosphaerihabitans: AB5I40_22350
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Entry
AB5I40_22350 CDS
T11563
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
arhi Amycolatopsis rhizosphaerihabitans
Pathway
arhi00020
Citrate cycle (TCA cycle)
arhi00190
Oxidative phosphorylation
arhi00650
Butanoate metabolism
arhi00720
Other carbon fixation pathways
arhi01100
Metabolic pathways
arhi01110
Biosynthesis of secondary metabolites
arhi01120
Microbial metabolism in diverse environments
arhi01200
Carbon metabolism
Module
arhi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
arhi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
arhi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AB5I40_22350 (sdhA)
00650 Butanoate metabolism
AB5I40_22350 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
AB5I40_22350 (sdhA)
00720 Other carbon fixation pathways
AB5I40_22350 (sdhA)
Enzymes [BR:
arhi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AB5I40_22350 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
FAD_oxidored
dGTP_diPhyd_N
GIDA
Motif
Other DBs
NCBI-ProteinID:
XEM67230
LinkDB
All DBs
Position
4868598..4870352
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AA seq
584 aa
AA seq
DB search
MQFHKYDVVIVGAGGAGMRAAIESGQRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAAVRRACYAADRTGHMILQTLYQNCVKHGTEFFNEFYVLDLVLSEGEDGNPVASG
VVAYELATGELHVFQAKSIVFATGGAGKIFKTTSNAHTLTGDGLGIIFRKGLPLEDMEFF
QFHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVQEVLQ
GRGCGPNKDYVVLDVTHLPVEVLETKLPDITEFSRTYLGVDPVKEPVPVFPTCHYVMGGI
PTNIHGEALRDNEHVIPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAGIAAAEYAL
AHDHVELPESPTTLVEEQLELLLSEHGDERVADIRKEMQQTMDSHASVYRTEDTLKQALT
DIQALKERYQRITVADKGKRYNTDLLEAVELGFLLELAEVLVVGAIARKESRGGHAREDY
PNRDDTNFMRHTMAYKQGEGLSADIRLDYKPVTFTRYEPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccacaagtacgacgtggtgatcgtcggcgcgggcggcgccggcatgcgcgcg
gccatcgagtccggtcagcgcgcccgcaccgcggtcctcaccaagctgtacccgacccgc
tcccacaccggcgcggcgcagggcggcatgtgcgccgcgctggccaacgtcgaagaggac
aactgggagtggcacaccttcgacaccgtcaagggcggtgactacctggtcgaccaggac
gccgcggagatcatggccaaggaggccatcgacgccgtcctcgacctggagaagatgggc
cttccgttcaaccggacgcccgagggcaagatcgaccagcgccggttcggcgggcacacc
cgcgaccacggcaaggccgcggtgcgccgcgcctgctacgccgcggaccgcaccgggcac
atgattctccagacgctgtaccaaaactgcgtcaagcacggcaccgagttcttcaacgag
ttctacgtgctcgacctggtcctgtccgagggcgaggacggcaacccggtcgcctccggc
gtggtcgcctacgagctggccaccggcgaactgcacgtgttccaggcgaagtcgatcgtg
ttcgccaccggcggcgcgggcaagatcttcaagaccacttcgaacgcgcacaccctgacc
ggcgacggcctcggcatcatcttccgcaagggccttccgctggaggacatggagttcttc
cagttccacccgaccggcctcgccggcctcggcatcctgatctccgaggcggtgcgcggc
gagggcggcatcctccgcaacgccgacggcgaacggttcatggagcgctacgcccccacc
atcaaggacctcgcgccgcgcgacatcgtcgcccggtcgatggtccaggaggtgctgcag
ggccgcggctgcgggccgaacaaggactacgtcgtcctcgacgtgacccacctgccggtc
gaggtcctcgagaccaagctgccggacatcaccgagttctcccgcacctaccttggcgtc
gacccggtcaaggagccggtgccggtgttcccgacgtgccactacgtcatgggcggcatc
ccgacgaacatccacggcgaggcgctgcgcgacaacgagcacgtcatcccgggcctgtac
gccgcgggcgaggtcgcgtgcgtgtccgtgcacggttcgaaccggctgggcacgaactcg
ctgctggacatcaacgtgttcggccgccgcgcgggcatcgccgccgcggagtacgcgctg
gcgcacgaccacgtcgagctcccggagagcccgaccacgctggtcgaggaacagctggag
ctgctgctgtcggagcacggcgacgagcgcgtcgccgacatccgcaaggaaatgcagcag
acgatggactcgcacgcgtcggtgtaccgcaccgaggacacgctgaagcaggcgctgacc
gacatccaggcgctcaaggagcgctaccagcggatcaccgtggcggacaagggcaagcgg
tacaacaccgacctgctcgaggccgtcgagctcggcttcctgctggagctggccgaggtg
ctggtcgtcggcgcgatcgcgcgcaaggagtcccgcggcggccacgcccgcgaggactac
ccgaaccgcgacgacacgaacttcatgcggcacaccatggcctacaagcagggcgagggg
ctgtcggccgacatccggctcgactacaagccggtcaccttcacccgctacgaaccgatg
gagcggaagtactga
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