Amycolatopsis rhizosphaerihabitans: AB5I40_23030
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Entry
AB5I40_23030 CDS
T11563
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
arhi Amycolatopsis rhizosphaerihabitans
Pathway
arhi03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AB5I40_23030 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
arhi03011
]
AB5I40_23030 (rpsD)
Ribosome [BR:
arhi03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AB5I40_23030 (rpsD)
Bacteria
AB5I40_23030 (rpsD)
Archaea
AB5I40_23030 (rpsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
XEM67358
LinkDB
All DBs
Position
complement(5018997..5019602)
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AA seq
201 aa
AA seq
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MARYTGPATRISRRLKVDLIGGDQAFERRPYPPGQHGRGRIKESEYLLQSQEKQKARYTY
GVLERQFVRYYKEAVRRPGKTGENLLQILESRLDNVIYRAGIARTRRQARQLVSHGHFLV
NGVKVNVPSYQVTKWDIIDVKPKSAGTLPFVAAKEAFGERPVPAWLQVVPSNLRVLVHQL
PERAQIDVPVQEQLIVELYSK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggctcgttacaccggccccgcgacgcgtatttcgcgtcgcctcaaggttgacctcatc
ggcggcgaccaggctttcgagcgtcgcccctacccgccgggccagcacggccgcgggcgc
atcaaggagtccgagtacctcctgcagtcgcaggagaagcagaaggctcgctacacctac
ggcgttctcgagcgccagttcgtccggtactacaaggaagccgtgcggcgtccgggcaag
accggtgagaacctgctgcagatcctcgagtcccggctggacaacgtgatctaccgcgcc
ggcatcgcccgcacccgccgtcaggcgcggcagctggtgagccacggccacttcctggtc
aacggcgtcaaggtcaacgtgccgtcctaccaggtcaccaagtgggacatcatcgacgtc
aagccgaagtcggcgggcacgctcccgttcgtcgcggcgaaggaagccttcggcgagcgt
ccggttccggcgtggctgcaggtcgttccgtcgaacctccgcgtgctggtccaccagctc
ccggagcgcgcgcagatcgacgttccggttcaggaacagctgatcgtcgagctttactcg
aagtaa
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