Amycolatopsis rhizosphaerihabitans: AB5I40_35365
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Entry
AB5I40_35365 CDS
T11563
Name
(GenBank) DNRLRE domain-containing protein
Organism
arhi Amycolatopsis rhizosphaerihabitans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Golvesin_C
TEN_YD-shell
Disaggr_repeat
TGFb_propeptide
DUF6531
CBM_35
Motif
Other DBs
NCBI-ProteinID:
XEM69672
LinkDB
All DBs
Position
7527254..7535707
Genome browser
AA seq
2817 aa
AA seq
DB search
MAPEAKRLAEKVEQRTLTTKAFPLSDGRTQLQVSQTPLHYRDTAGHWQDIDTRIEKTSAP
EGFVYRSEHNTFHSSFGVKTDHLVGFKQGEREIRLGIAGESRSLEPRVEGSAITYPGAFP
GADVVYQVTPDALKEKLVLAKPPAQGPSYSFTMDLAGVEAAQQKDGSIAFFRAGGDRDGG
PLFVMAKPFMLDGRDDAASPYGKSWSGKVAQTVRAEGNRFTITVTADQEWLRAKERVYPV
VIDPTIKIQPTATQAQDTMVTSDEPDANHDGSWRLSVGATNSGTARSLLKFDLANIPAGT
RLDSAQLQVYYDQDHTTGANDVTVEAHRATQPWTASTATWNSSAAAFAEVGQNQDNVDDG
EPGRTAANGEWRTVDTGDAEQAVGHSYRVGSRGGDYTWVPRLTEDGDYQVEVHYVPGANR
ASNTPYTVFYNGGQQTVPVDQTASAAGGWKSLGTWPFKAGTGHKVVLGGVPGKEVVADAV
RLTKPGTQVKKANKANVWHSFSVRSTVQSWLDGAQPNHGFLLKAADETRGMGGPRYEAAE
YAYNGATEQTPRLLLTYGKPGPALDAPTTIRATGANLTWSAYPGNDLVEYQVHRSVFQQF
TPTAATLVAPLRPGTASYADTTAQPTKADDPQPFGNAFYYVVAAITRDGQLIPSATQLVR
LPKAGQVVKVLQGNAADTTLASKQPDQPHDKLTGEPWLSVGNNSGTFGATRGVVKFPDLG
GIPSGARVQNAELSLWGFTYVGGTPVGTGTYEAHGLTKDFDQGSATWNKASAGRAWSTPG
GDFDPAVAGTTTGVTNDPALRVLGVTGLAQRWVNDPASNHGALVKLADEANPAERTIFLS
SEAAEPRLRPKLTVVYTEQTAESTYYAPTTPDRMIPGDEYPVPVTLTNTTGAAWPAADYA
LSYHWELPDGTDVTGPGNRLETPLPKDIAPDGVVAVDAKVKTATPFDLGNKREAFVLKWD
LRNRTTGKWLSETTKIPPLAQNITIDDPKSDQLGLEKFYSYSGGNTGAGSTLMVNQFAGN
AVWSYNALSNPSRGLATFLRMTYNAQDTSNSYIGSGWSLSASTLARLGTPLEFYGWGGAG
YPAKIVLTDGDGTSHQFALNKHDSPDPRLWDYDKPAGVHLYLQRTGSSDPNRTWVMTRPD
RTQLVFDSDGYQSATVDKNGNELQFTYERSCVNNHNTGILKYLTDATGRRTLNFEYFQNG
DPDYDYFTGDKKHHGVNLANGKIANQLKAITDISGRRIEFVYSDRGLLQEITDGAGTDQH
KTFTFFYNNALLNKNAKLISVTDPRGNSTGLSYYDDPARKWKTRTLTNRAGKDTSFDYRY
PDPEHSSAVDSIVTDANGHASDTLIDGYGRPTKLTNAKNQTTELTWDADNNVRRLAEDGG
KAVATWEYDPVTGYPKSIADAEANANKTPATALNYRTGLGGHVADLTEKITPEGRKWLFT
YDDRGNLVAVTDPKGSGDPASGHYTTLSSYDSYGQLLTVTDANNNTTTFGDYDPIGSPRQ
ITDAYGHDTLTKFDATGNVLSTMDARKKVSEYTYDLFGRPLSSKVPKDADKGDFIFTPGA
QYDSNDNVIKTTAANGAVTSAAYRPTDEIAAVSAPKDDAGDPDRTTTYDYDNVGNLLRQT
DPKGALTPDPGDFTTTREYDQLNRVIATVDASGNRATYDYDNVGNLTTVVDPRKTATHDP
KAYTAKYAYDLNHRVKTVTDAAGFTTGRKYDRDGNIVETTDAEQNTSVLKLDARAMVEEQ
WVPRAKDASGNPVYRKTRFEYDEVGNKTKVISPRGTEIAGNTDNFAAVTVYDKLNRPIEQ
QTPFDVNDERVKTPDKTTYSYDEVGRLTEVSAPPSNGQNFRNVTRTSYFDTGWLRSSVDP
WNITTTYDYDQLGKQTARTLTAAGGSMSRTMAWSFYPDGKLKSRSDDGVPIGRDVRVIDN
SDPAAIVTGTWGTGGADPNPDYEGFDYRRHNPGTGSDTVAWNLDAPRTGTYEIFVRYPKA
ATATNATYTIDHDGGSTTKTVDQTQQPGQWVSLGSYGLTEGQPRKVTLSDKANGVVAADA
VKIVRDGSGETGPAQQKTFGYRYDPNNNLVDITDSSPNTKIDNYAIAYNGLNQIQQVQEK
LKGAVAKTTTYSYDPNGNPKTRDHDDQHSVYEYDVRDLVEKVTNTDTGGAPQNTTYTYTP
RAQKLLETKANGNQLQSEYFPDGALRHEVERKPDGTIVSEHTRDYDANGNPAHDTQHTMN
ADNHGAYLDNTRAFAYDPRDRLRSSTKTEPSGATLGVEKYLHDANNNVIEQTIDGKTTKY
TYDRNRLVTSSIDKNTSTHTYDPFGRLDNVTVDGTLLEKYRYDGFDRIAEYQKLKEGSAT
ERVTTTYAYDPLDRTLAKTEGGKTTDFAYLGLSSNVLNEKLAGKLDKSYQYSPNGQRLSQ
TKQTGDGGKETTQYGYNPHTDVETLTTDKGDTKATYGYTAYGSDDKQSFTGIDKPKPQDP
SAQAYNSYRFNGKRYDTASGNYDMGFRHYSPGRNTFLTRDSYNGALGDLGLTTDAFSGSR
YAFTGGNPVSRVELDGHIDTDTYRCGEIHSCAQADLAYREQHNVQIPEGLREKASAEAGV
NSAMNTPATGGELPKEKLDVLRGFGYEGSSGFTWREAMEFANRGPATEALVCDTLGGSLD
ECRMGQPLHGVAGFIYDVFLSNIPACATMDALACGGVALEVGGGAAGKFIGKVFGDAKKV
EGGIAANKINGDAAADAIAAGFPGAQREVTLQAASGARRIDVLTTSGVAIESKLGRTSLT
SDIKMQIQKDVEIMQRSIGGVKSVEWHFTKSPVTGLGGPTGPLLQALQSANIRVVIR
NT seq
8454 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgaggcgaagcggctggccgaaaaggtcgagcagcggacgctcacgaccaag
gctttccccttgtcggacggtcggacgcagctccaggtgtcgcaaacgccgctgcactat
cgcgacaccgccgggcactggcaggacatcgacacccggatcgagaaaacgtccgcgccg
gagggtttcgtttaccgcagcgaacacaacactttccacagttctttcggggttaaaacg
gatcatctcgtcggtttcaagcaaggcgaacgggaaatccggctcggtatcgccggtgaa
tcgcgttcactggaaccgcgcgtcgagggcagtgcgatcacctatccgggcgcattcccc
ggtgccgatgtggtgtaccaggtgaccccggacgcgttgaaagaaaagctcgtgctggcc
aaacctccggcccaggggccgagctacagcttcaccatggacctggccggtgtcgaggcc
gcgcagcaaaaggacggttcgatcgccttcttccgcgcgggcggggaccgcgacggcggg
ccgctgttcgtcatggccaagccgttcatgctggacggtcgcgacgacgcggcttctccg
tacgggaagtcgtggagcggaaaggtcgcccagacggttcgcgccgagggcaaccggttc
acgatcacggtgaccgcggaccaggaatggctgcgcgccaaggaacgcgtgtacccggtg
gtgatcgacccgaccatcaagatccagcccaccgccacccaggcgcaggacacgatggtg
acctccgacgagccggacgccaaccacgacggcagctggcggctctcggtcggagcgacg
aactccggcaccgcgcgcagcttgctgaagttcgacctcgcgaacattccggctggcacg
cggctggattcggcgcagctgcaggtgtactacgaccaggaccacacgacaggcgccaac
gacgtcaccgtggaagcgcaccgcgcgacccagccgtggacggcgagcaccgcgacctgg
aattcctccgcggccgcgttcgccgaggtgggccagaaccaggacaacgtcgacgacggc
gaacccggtcgtaccgccgcgaacggcgagtggcgcacggtcgataccggcgacgctgaa
caggcggtgggccacagctaccgggtcggcagccgcggcggcgactacacctgggttccc
cgcctcaccgaggacggcgattaccaggtcgaggtgcactacgtgcccggagcgaaccgg
gcgtccaacacgccgtacaccgtgttctacaacggcgggcagcagaccgtgccggtggac
cagaccgcctcggccgccggcggatggaagtccctgggcacctggccgttcaaagcgggc
accgggcacaaggtcgtgctcggcggggtgccgggcaaggaggtcgtggccgacgccgta
cgcctgaccaagcccggcacgcaggtcaagaaggcgaacaaggccaatgtgtggcacagc
ttcagcgtgcgttcgaccgtccaaagctggctggacggcgcacagcccaaccacggtttc
ctgctcaaggccgctgacgagacgcggggcatgggcggtccgcgctacgaggccgccgag
tatgcctacaacggcgcgaccgagcagaccccgcgactgctgctcacctacggcaaacct
ggtcccgccctggacgcgccgacgacgatccgagctaccggcgcgaacctgacctggtcg
gcctatccggggaacgacctggtcgagtaccaggtccaccgttcggtattccagcagttc
accccgacggcggcgacactcgtcgccccgctgcgtcccggcaccgccagctacgccgac
accacggcgcagccgaccaaagccgacgatccgcagccgttcggcaacgccttctactac
gtcgtcgcggccataacgcgcgacggccagctgatcccgtccgcgacgcagctggtgcgg
ctgcccaaagcgggccaggtcgtcaaggtccttcagggcaacgccgccgacaccaccctg
gccagcaagcaacccgatcagccgcacgacaagctgaccggcgagccgtggctgtcggtc
ggcaacaactccggcaccttcggcgcgacccgcggcgtggtgaaattcccggatctgggc
gggattccgtccggcgcgcgagtgcagaacgcggagctcagcctctggggcttcacctac
gtcggcggcacgccggtgggcaccggcacttacgaagcgcacgggctcacgaaggacttc
gaccagggcagcgccacctggaacaaggcgagcgcgggtcgcgcctggtcgactcccggc
ggcgatttcgacccggccgtcgccggaaccaccaccggagtcacgaacgaccccgctttg
cgcgtcctcggcgtgaccggtctggcacagcggtgggtcaacgatccggcgagcaaccac
ggcgcgctggtgaagctggctgacgaagccaacccggccgagcgcacgattttcctcagc
agcgaggccgccgagccgcgcctgcgcccgaaactgaccgtggtctacaccgaacagacc
gcggaaagcacctactacgccccgaccacgccggaccggatgatccccggcgacgagtac
cccgtcccggtcaccctcaccaacacgaccggcgcggcctggcccgcggccgactacgcg
ttgtcctaccactgggaactgcccgacggcaccgatgtgaccggccccggcaaccggctc
gagacgccgctgcccaaggacatcgcgcccgacggcgtggtcgcggtcgacgcgaaagtg
aagacagcgaccccgttcgacctcggcaacaaacgcgaagccttcgtgctgaagtgggac
ctgcggaaccggacgaccgggaagtggctgtcggaaacgacgaagatcccgccgctggca
cagaacatcacgatcgacgatccgaagtcggaccagctgggcctggagaagttctactcc
tactccggcggcaacaccggagccggctcgaccctgatggtcaaccagttcgcgggcaac
gcggtgtggtcctacaacgcgttgagcaatccgagccgcggcctggcgacgttcctgcgg
atgacctacaacgcccaggacacgtccaactcctacatcggttccggctggtctctctcc
gcctccaccttggccaggctgggcaccccgctggagttctacggctggggcggggcgggg
tatccggccaagatcgtgctgaccgacggggacggcaccagccaccagttcgcgctgaac
aagcacgacagccccgacccgcggctgtgggactacgacaagcccgccggcgtccatctc
tacctgcagcgcaccgggagcagcgacccgaaccgcacgtgggtgatgacgcggccggac
cgtacccagctcgtgttcgacagcgacggctaccagagcgccaccgtcgacaagaacggc
aacgagctccagttcacctacgaacgctcgtgcgtcaacaaccacaacaccggcatcctg
aaatacctcaccgacgccaccggccgccggaccctgaacttcgagtatttccagaacggc
gacccggactacgactatttcaccggcgacaagaagcaccacggcgtcaacctggccaac
ggtaagatcgccaaccagctcaaggcgatcaccgacatctccggacgccgcatcgagttc
gtctacagcgaccgcggcctgctgcaggagatcaccgacggcgcgggcaccgatcagcac
aagacgttcaccttcttctacaacaacgcgttgctgaacaagaacgcgaagctgatctcg
gtcaccgacccgcgcggcaattccaccggactgtcctattacgacgatccggcccgcaaa
tggaagacgcggacgctgaccaaccgggccgggaaagacaccagcttcgactaccgctac
ccggatccggagcacagttcggcggtcgactcgatcgtgaccgacgccaacggccacgcg
tccgacacgctcatcgacggctacggccgcccgacgaagctgaccaacgcgaagaaccag
accaccgaactgacctgggacgccgacaacaacgtccgccgcctggccgaggacggcggc
aaggccgtcgccacctgggaatacgacccggtcaccggctacccgaagagcattgccgac
gccgaggccaacgcgaacaaaaccccggctaccgcgctgaactaccggaccgggctgggc
ggccacgtcgccgacctgaccgagaaaatcacccctgaaggccgcaagtggctgttcaca
tacgacgaccgcggaaacctggtcgccgtcaccgatcccaagggcagcggagatcccgct
tccggccactacaccactttgagcagctacgacagctatggccagctgctgaccgtcacc
gacgccaacaacaacaccacgaccttcggggattacgaccccatcggctcgccgcgccag
attaccgacgcctacggccatgacaccctgaccaagttcgacgctacgggcaacgtgctg
tccacaatggacgcacgcaagaaggtcagcgagtacacctacgacctcttcggcaggccg
ctgtcgtccaaggtgcccaaggacgccgacaagggcgacttcatcttcacccccggcgcg
caatacgactcgaacgacaacgtcatcaaaacgacggcggccaacggcgcggtcacctcg
gccgcttaccggcccactgacgagatcgccgcggtcagcgcccccaaggacgatgcaggc
gatcccgaccggaccacgacttacgactacgacaacgtcggaaacctgctgcggcaaact
gatccgaagggcgccctgacgcccgaccccggcgacttcaccacgacccgggaatacgac
cagctcaaccgggtcatcgccaccgtcgacgccagcggcaaccgggccacatacgactac
gacaacgtcggcaacctcaccaccgtggtcgacccgcgcaagaccgcgacgcacgacccc
aaggcgtacacggcgaagtacgcctacgacctgaaccaccgcgtcaaaacggtcactgac
gccgcgggcttcaccaccggccggaagtacgaccgagacggcaatatcgtcgagactacc
gatgccgagcagaacacctcggtgctcaaactcgacgcccgcgccatggtcgaggagcaa
tgggtgccgcgcgccaaggacgcgtcgggcaatcccgtctaccgcaagacccgcttcgag
tacgacgaggtcggcaacaagaccaaggtcatttccccgcgcggcacggagatcgccggc
aacaccgacaacttcgccgcggtcactgtctacgacaagctgaaccgcccgatcgaacag
cagaccccgttcgacgtcaacgacgaacgcgtcaagacgccggacaagacgacctacagc
tacgacgaggtcggccggctcaccgaagtcagcgcgccgccgtccaacggccagaacttc
cgcaacgtcacgcgcaccagctacttcgacaccggctggctgcgctccagcgtcgacccg
tggaacatcaccaccacctacgactacgaccagctcggcaagcagactgcccgcacgctc
accgcggccggcggatccatgagccgcaccatggcgtggtcgttctacccggacggaaag
ctgaagtcgcgctccgacgacggcgtcccgatcggccgggatgtgcgggtgatcgacaac
agcgaccccgccgccatcgtcaccggcacctggggcaccggcggggccgacccgaaccct
gactacgaaggcttcgactaccggcggcacaaccccggcacgggcagtgacacggtcgcc
tggaacctcgacgcgccgcgcaccgggacctacgagatcttcgtccgctatcccaaggca
gccaccgccaccaacgccacctacaccatcgatcacgacggcggcagcacgaccaagacc
gttgaccagacccagcaacccggccaatgggtcagcctcggctcgtacggtctcaccgaa
ggccagccgcgcaaggtcactctgtcggacaaggccaacggcgtcgtagccgcggacgcg
gtgaagatcgtccgcgacggcagcggcgaaaccggcccggcccagcaaaaaacgttcggc
taccgctacgacccgaacaacaatctggtcgacatcaccgactcgagtccgaacaccaag
atcgacaactatgcgatcgcgtacaacgggctgaaccagatccagcaggtccaggaaaag
ctcaagggcgccgtagccaagaccaccacctacagctacgaccccaacggcaacccgaag
acccgggaccacgacgaccagcactcggtgtacgagtacgacgttcgcgacctggtcgag
aaggtcaccaacaccgacaccggcggtgcgccgcagaacacgacctacacctacacgccc
cgagctcagaaactcctcgaaaccaaggcgaacggcaaccagctccagtccgagtacttc
ccggacggcgcactgcggcacgaggtcgaacgcaagcccgacggcacgatcgtcagcgaa
cacacccgcgactacgacgccaacggcaaccccgcgcacgacacgcaacacacgatgaac
gccgacaaccacggcgcttatctggacaacacccgcgccttcgcttacgacccccgagac
cggctccgctcatcgaccaagacggagccttcgggcgccaccctcggcgtcgagaagtac
ctgcacgatgcgaacaacaacgtcatcgagcagacgatcgacgggaagaccacgaagtac
acgtatgaccgcaaccggctggtcacgtcgtcgatcgacaagaacaccagcacgcacact
tacgacccgttcggtcggctggacaacgtgactgtcgacgggacgttgctggagaagtac
cggtacgacggcttcgatcgcattgcggagtaccagaagctcaaggaaggcagcgcgact
gagcgggttacgacgacgtatgcgtacgacccgctggaccggacgctcgccaagaccgag
ggcggtaagaccactgatttcgcttatctcggtctgtcttccaatgtcttgaacgagaag
cttgccgggaagctggacaagtcttaccagtacagccccaatgggcagcggctgtcgcag
accaagcagaccggtgacggtggcaaggagacgactcagtacgggtataacccgcatacg
gatgtcgagactcttactacggataagggcgatacgaaggcgacttacggttatacggct
tacgggagtgacgacaagcagtcgtttaccgggattgacaagcctaagccgcaggatcct
tcggcgcaggcctacaactcctaccgcttcaacgggaagcgttacgacactgccagcggc
aattacgacatggggttccgtcactacagtccgggccgcaacaccttccttactcgcgat
tcctacaacggtgcgctcggtgatctggggttgaccaccgatgctttctccggaagccgt
tatgcgttcaccggtggaaatccggtcagccgagtcgagctcgacggtcatatcgacact
gatacctatcgatgcggggaaatccacagttgtgcccaggctgacctggcctatcgcgag
cagcacaatgtccagatcccggaggggcttcgcgagaaagccagcgccgaggctggggtg
aacagtgcgatgaacacgcctgcgacaggcggtgaattgcccaaggaaaagctggatgtg
ctccgtgggttcggctacgaaggctcatcgggattcacctggcgcgaagcgatggagttc
gccaaccgaggcccggcgacagaagctctcgtctgcgacactctcggcggatctctcgac
gaatgccggatgggtcagccgttgcacggggtggccgggttcatctacgacgtcttcctg
tccaacattccggcgtgcgccacgatggatgcgctggcgtgcggcggggtagcacttgaa
gtcgggggcggagctgccggaaagttcatcggcaaggtcttcggcgacgcgaagaaggtc
gagggcgggattgcggcgaacaagatcaacggtgacgctgcggcggacgcgattgctgca
ggatttccaggtgctcagcgtgaggtcacgctgcaggccgcctcgggggcccgtagaatc
gatgttctgacgaccagcggtgtcgccattgagtcgaagcttggtcgcacgtcactgacc
agcgacatcaaaatgcagatacaaaaagatgtggaaatcatgcagagatctatcggcggt
gtcaagtcggtcgaatggcatttcacgaagagcccggtgacgggtcttggcggtcccacg
ggtccgctgcttcaggcgttgcagtccgcgaacatccgtgtggtaataaggtaa
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integrated database retrieval system
