Amycolatopsis rhizosphaerihabitans: AB5I40_37485
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Entry
AB5I40_37485 CDS
T11563
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
arhi Amycolatopsis rhizosphaerihabitans
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_11
AAA_30
Viral_helicase1
AAA_19
PDDEXK_1
NAT10_TcmA_helicase
UvrD_C_2
SLFN-g3_helicase
AAA_25
NPHP3_N
nSTAND3
AAA_22
PIF1
AAA_16
IstB_IS21
ResIII
MobB
MeaB
AAA
NACHT
AAA_18
Motif
Other DBs
NCBI-ProteinID:
XEM70076
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All DBs
Position
7997203..8000553
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AA seq
1116 aa
AA seq
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MYTPSDLADLLECEHRSILKQALAAGIPGAPRPSSAPDRLAVKHGRAHEAATLSRLRGER
TQVVEIEEHDPVVAAKATEEALRAGAPVVYQAVFHDGEFSGRADFLLRDDQGRYEVYDTK
LARHAKPSAVVQLTAYADALRRGGWPTGPEMHLLLGDGSTRSLRVDDFLPLVDRLRDRLQ
DRPPQLPDRVWADERPACTGCAFADHCSSAREADRDLSLVAGMRSEQRRKLVTAGLGTID
ALAGSEPADRPRDMSEGTFASLRAQAAIQVRQDETGELAYEIIAPDALAELPEASPGDVF
FDMEGDPYALAGTGLEYLFGAVTPDERFTPFWAHSRAQEKRAFEEFIDFATARLAEHPDA
HVYHYAPYEVTAIKRLAAVHGTREEAVDELLRSGAMIDLYAVVRKALRVGQRSYSIKYLE
PLYMPEARDGEVKTAASSIEAYEDYLTLSSAGNTEQADEILRGIADYNEYDCVSTLRLHE
FLHRVRTEAGIDLAEPDPESEVDALLRRTEEEEAAQRRAERAAAMAALVDPLLEGLPEDP
ADFTPDDHARALLAASVGYHRRETNPAWWEFFRQLAAPLSDLEVDTTCAVPVSVTAGEWV
PPSGRLRTAKRTLTVRCDPDRPHPFAPGDDVRLRYGADARDAKVVSATAVEVTLEESSAP
DRTPNDLPAAVLPGSPVRPSPKDEAVADLARLVGETLPALPSHPGVDLLRRIPRLRGGLP
EPGEDLVATVITAVDQLDGSVLAVQGPPGAGKTYLAGKLIAHLVRSGRTVGVTSNSHKAV
ENVLSAAMENAPEMACAKRAKRTPDPELPWEQPKNNNALVRWREEHDTGHLVGGTAWTFA
NAAVREEPFDVLVIDEAGQFALADALAVSMCAKNVVLLGDPQQLPQVVQGTHPAGAEASA
LGHLIGDADIIPPELGYFLDLTRRMHPAVCAPVSNLSYAGLLHSHPSAERSIDGFPSGLY
LATVEHSGNTTRSVEEAEEVVSVIKSLHGRSWEGRPLTDADFLVVAPYNLQARVVTRALS
DAGFGDVRVGTVDRFQGQEAPVVVTTMTSSSAVDLPRGLDFLLSRNRLNVALSRAQSVAV
LVCSPKLLEADIRTVDQMRLVSGMLGLLRDAREWID
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtacacgccgtctgatctcgctgacctgctcgaatgcgagcaccggagcatcctcaag
caggcattggcggcggggatacccggcgcgccacgacccagttccgcacccgatcggctg
gcggtgaagcacgggcgcgcgcacgaggcggccacgctgagccggttgcgcggcgagcgg
acgcaggtcgtcgagatcgaggagcacgatccggtcgtcgcggcgaaggccaccgaggaa
gcgctgcgcgcgggagcgccggtcgtctaccaggcggtgttccacgacggcgagttctcc
ggacgcgccgatttcctcctgcgcgacgaccaaggccgctacgaggtctacgacacgaaa
cttgcccggcacgccaagccgtccgcggtcgtgcagctcaccgcgtacgccgacgctctg
cgccgcggcggctggcccactgggccggagatgcacctgctgctcggcgacggcagcacg
cgcagcctccgcgtcgacgacttcctcccgctcgtggaccgcctccgcgaccggttgcag
gaccgtccgccgcagttgccggaccgggtctgggccgacgagcgtccggcgtgcaccggg
tgtgcgttcgccgatcactgttcgtccgcgcgcgaggccgaccgggacctgtcactggtc
gccggaatgcgcagcgagcagcggcgcaagctggtgaccgccgggctcggcaccatcgac
gcgctcgccggctccgaacccgccgaccgtccgcgcgacatgtccgagggcacgttcgcc
tcgttgcgcgcgcaggccgcgatccaggtccgccaggacgaaaccggcgagctggcctac
gaaatcatcgccccggacgcgctcgccgaactgcccgaagccagccccggcgacgtcttc
ttcgacatggaaggcgacccgtacgctctggccggcaccggcctggagtacctcttcggc
gcggtcaccccggacgagcgcttcaccccgttctgggcgcactcgcgcgcgcaggagaaa
cgagcgttcgaggagttcatcgacttcgccaccgcgcggctcgcggaacaccccgacgcg
cacgtctaccactacgcgccgtacgaggtcacggcgatcaagcggctcgccgccgtccac
ggcacgcgggaggaagccgtggacgagctgctgcgcagcggcgcgatgatcgacctgtat
gccgtggtacgcaaggctttgcgggtaggacagcggtcgtattcgatcaagtatttagaa
ccactgtacatgccggaagcccgcgacggcgaggtaaaaacggcggcgtcgagcatcgag
gcgtacgaggactacctgacgctctcctccgcgggaaacaccgagcaggccgatgaaatc
ctgcgcggcatcgcggactacaacgagtacgactgcgtctccaccttgcgcctgcacgaa
ttcctccaccgcgtgcgcaccgaagccggaatcgacctggccgaaccggaccccgagtcc
gaagtggacgctctcctgcgccgcaccgaagaagaggaagccgctcagcgccgggccgaa
cgagccgccgccatggcggctttggtcgacccgctcctggaaggcctccccgaggacccc
gcggatttcacccccgacgaccacgcccgcgccctgctggcggcctccgtcggctatcac
cggcgcgagacgaacccggcgtggtgggagttcttccggcagctggccgccccgctcagc
gacctcgaagtggacacgacctgcgcggtcccggtgtcggtgacagcgggcgagtgggtg
ccgccgtccggccggttgcgcaccgcgaaacgcacgctgaccgtgcggtgcgacccggac
cggccgcatcccttcgcgcccggtgacgacgtgcgattgcgttacggcgccgacgctcgc
gacgcgaaagtcgtgtccgcgacggcggtcgaagtgaccctggaggagagcagcgctccg
gatcggacgcccaacgaccttcccgcggcggtcctgccgggcagccccgtccgtccgtcg
ccgaaagacgaggcggtagccgatctcgcccggctggtaggggaaactctgcctgcgttg
ccgtcacaccccggcgtcgacctgctccgccgaatcccccggttgcgcggcggtttgccc
gaaccgggggaagatctggtcgccacggtgatcaccgcggtcgatcagctcgacggttcc
gtcctcgccgtccagggtccgcccggagctggaaagacttacctggccgggaaactcatc
gcgcatctggtgcgttcaggccggacggtcggcgtcacgtcgaacagccacaaagcggtc
gagaacgtgctctcggcggccatggagaacgcgccggaaatggcctgcgccaagcgcgcg
aagcggacaccggacccggaattgccttgggagcaaccgaaaaataacaacgcgctggta
cgctggcgtgaagaacacgacaccggtcacctggtcggcggcactgcatggaccttcgcc
aacgccgctgtgcgcgaggaacccttcgacgtcctggtgatcgacgaagccggtcagttc
gccctcgcggacgcgctggcggtgtcgatgtgcgcgaaaaacgtggtgctgctgggggat
ccgcagcagctgccgcaggtggtgcaaggcacgcatccggcaggcgcggaggcgtccgcg
ctgggccacttgatcggcgacgcggacatcatcccgccggaactcggatatttcctcgac
ctgacgcgccgcatgcaccccgcggtgtgcgcgccggtctcgaacctgtcgtacgccggt
ttgctgcactcgcatcccagcgcggaacgttcgatcgacggcttcccgtcgggtctctat
ctggcgacggtcgagcacagcgggaatacaacgcgttcggtggaggaagccgaggaggtc
gtctcggtgatcaagtcgttgcacggccgttcgtgggaaggccgaccgctcactgacgcc
gatttccttgtcgtggccccgtataacctgcaggcgcgagtggtgacgcgtgcactgtcc
gatgctggtttcggcgacgtccgggtcggcaccgtggaccggttccaagggcaagaagca
cccgttgtggtgacgacaatgacgtcctcttcggcggtagacttgccacgaggccttgat
ttcttgttgtcccgcaaccggttgaatgtcgctctctcacgcgcgcagtccgtcgcggtc
ctggtgtgctcgccgaagctgctcgaggcggacatcagaacggtggaccagatgcggctg
gtctccgggatgctcgggttgctgcgcgacgcccgcgagtggatcgactga
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