Amycolatopsis rhizosphaerihabitans: AB5I40_43295
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Entry
AB5I40_43295 CDS
T11563
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
arhi Amycolatopsis rhizosphaerihabitans
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arhi03000
]
AB5I40_43295 (soxR)
Transcription factors [BR:
arhi03000
]
Prokaryotic type
Helix-turn-helix
MerR family
AB5I40_43295 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
Motif
Other DBs
NCBI-ProteinID:
XEM71183
LinkDB
All DBs
Position
complement(9252138..9252605)
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AA seq
155 aa
AA seq
DB search
MAKTELPELTVGELSHRSGVPASALRFYEDEQLIRSRRTAGNQRRYRRDTLRRVTFIRMS
QRVGMPLAQIREVLALLPDDRTPTRADWSRISSCWRSDLDQRIRQLEQLRDQLNDCIGCG
CMSLAKCRLANPNDQLGQDGPGPRRLPDHRGTGYE
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacggagctgcccgaactgaccgtgggcgaactctcccaccgcagcggcgta
ccagcgtcggccctgcggttctacgaggacgaacagctgatccgcagcaggcgcaccgcg
ggcaaccagcgccgctaccgccgcgacaccctgcggcgggtcacgttcatccgcatgtcg
cagcgggtgggcatgccgctggcgcagatccgcgaggtgctggccctcctgccggacgac
cggaccccgacccgcgcggactggtcccgcatctcgtcctgctggcgctccgaccttgac
cagcgcatccgccagctggaacaactccgggaccagctgaacgactgcatcggctgcggc
tgcatgtccctggccaaatgccgcctggccaaccccaacgaccaactgggccaagacggc
cccggcccgcgccgcctgccggaccaccggggaacgggatacgagtga
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