Aquimarina rhodophyticola: ACE939_06490
Help
Entry
ACE939_06490 CDS
T11453
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
arho Aquimarina rhodophyticola
Pathway
arho03030
DNA replication
arho03430
Mismatch repair
arho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACE939_06490
03430 Mismatch repair
ACE939_06490
03440 Homologous recombination
ACE939_06490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arho03032
]
ACE939_06490
03400 DNA repair and recombination proteins [BR:
arho03400
]
ACE939_06490
Enzymes [BR:
arho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACE939_06490
DNA replication proteins [BR:
arho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACE939_06490
DNA repair and recombination proteins [BR:
arho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACE939_06490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_22
DNA_pol3_delta_C
RuvB_N
AAA_14
AAA_30
AAA_5
RCF1-5-like_lid
TIP49
AAA_24
AAA_16
Rad17
AAA_7
DUF815
nSTAND3
iSTAND
AAA_18
DUF7486
AAA_assoc_2
Mg_chelatase
RNA_helicase
Sigma54_activ_2
NACHT
IstB_IS21
NPHP3_N
AAA_2
Motif
Other DBs
NCBI-ProteinID:
XHH97005
LinkDB
All DBs
Position
1464070..1465836
Genome browser
AA seq
588 aa
AA seq
DB search
MEQFIVSARKYRPQTFKDVVGQQAITNTLLNAIEHNHLAQALLFTGPRGVGKTSCARILA
KTINQDGSDQADEDFAFNIFELDAASNNSVDDIRNLIEQVRIPPQVGKYKVYIIDEVHML
SQAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVTDAKLHLMEVA
KSEGIIADEDALQIIAQKADGAMRDALSIFDRVVSFSGKELTRKAVTENLNVLDYETYFE
VTDLISNNNIPKVLLAFNEILAQGFDGHHFIAGLASHFRDLLVCKTPETIQLLEVGDQTK
QKYHEQSQKVSTQFLMKGIDLANDCDLKYKTSRNQRLLVELCLMQLASILSQNGEKKNDT
PYIIPPSYFRNKGINPIKISAENTKITDTTKNDSVTKRSEVDVEAQAIATSNPSTAITPK
ADEKTVDTPTIQFARERRTSGLSLTSIKKKKEHQERKAEKVVDPENLPYHPFTETEMLSQ
WTAYGKLQDAKGERILGSMFAMNTPTSKGDEIHLTLPNQSMKIDLENAQAGLLQFLYKKL
SNYKITLHIHVNEELSKKYAFTPQDKYEKLREKNPLIDKLRSSFDLDI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtttattgtatcagctagaaaatatcgcccgcaaacctttaaggatgttgta
gggcaacaagcgattacaaatacgttacttaacgctattgaacataaccatcttgcacaa
gctctattatttactggacctcgaggagttggtaaaacatcttgcgcacgtattttggca
aaaacgatcaatcaggacggttctgatcaggctgatgaagattttgcttttaatattttt
gagctcgatgcagcatctaacaactcggtagatgatatccgtaatttaattgaacaagtt
cgcatacctccacaagttggaaaatataaagtatatattattgatgaggtacatatgcta
tcgcaagctgcttttaatgcgtttcttaaaaccttagaagagccaccaaaacatgcaatt
tttatactcgccaccacagagaagcacaaaataatacctactattttatcacgttgtcaa
atatttgattttaaaagaatcactgtgaccgatgctaagcttcatttaatggaagtagcc
aagagtgaaggtattatagcagatgaagatgctttgcaaatcattgcgcaaaaggctgat
ggtgccatgcgtgacgcactatcaatttttgatcgtgtagtaagttttagtggaaaagag
ttaactcgcaaagctgttaccgaaaatttaaacgttcttgactacgagacttattttgaa
gttactgatttaattagtaacaataatatccctaaagtgttactggcttttaacgaaata
cttgcacaaggttttgatgggcaccattttattgctggattagcctcacattttagagat
cttttggtctgcaaaacaccagaaactattcaactcctagaagttggggatcaaaccaaa
caaaaatatcatgaacaatctcaaaaagtttctactcaatttttaatgaaaggtattgat
ctcgccaacgattgtgatctcaaatataaaacaagtcgtaatcaacgactgctcgtcgag
ttatgccttatgcaacttgcctctattcttagtcagaatggagaaaaaaaaaatgataca
ccctatataattccaccttcgtattttcgtaataaaggaattaatcctataaaaattagt
gctgaaaacactaaaattactgatactacaaagaatgattctgttacaaaacgttctgaa
gttgatgtagaagctcaagcaattgcgacatcaaatccatcaactgctataacaccaaaa
gcagatgaaaaaacagtcgacaccccgactatacaatttgccagagagcgaagaacatct
ggactatcactaacaagtataaagaaaaagaaagagcaccaagaaagaaaggccgaaaaa
gtcgtagaccctgaaaatttaccttatcatccgtttaccgaaaccgaaatgttatcacaa
tggaccgcgtatggaaaattacaggatgctaaaggcgaacgcattttaggatccatgttt
gcaatgaatacgcctacaagtaagggtgatgaaatacacctgacattacccaatcaatcc
atgaaaattgacttggaaaatgcgcaggctggattacttcaattcttatataaaaaacta
agtaattataaaattacactgcatattcatgtaaatgaagaattatccaaaaaatatgcg
tttaccccacaggataagtatgaaaagttgagagaaaaaaatccattaattgataaattg
agatcttctttcgacttagatatctaa
DBGET
integrated database retrieval system
