Aquimarina rhodophyticola: ACE939_14695
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Entry
ACE939_14695 CDS
T11453
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
arho Aquimarina rhodophyticola
Pathway
arho03030
DNA replication
arho03430
Mismatch repair
arho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACE939_14695 (dnaE)
03430 Mismatch repair
ACE939_14695 (dnaE)
03440 Homologous recombination
ACE939_14695 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arho03032
]
ACE939_14695 (dnaE)
03400 DNA repair and recombination proteins [BR:
arho03400
]
ACE939_14695 (dnaE)
Enzymes [BR:
arho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACE939_14695 (dnaE)
DNA replication proteins [BR:
arho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACE939_14695 (dnaE)
DNA repair and recombination proteins [BR:
arho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACE939_14695 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
MSH_C
OB_MCM10
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
XHH95549
LinkDB
All DBs
Position
complement(3380210..3384595)
Genome browser
AA seq
1461 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDSDNWPRCIQIAWQLHDAMGNCIEHQDYLVKPDGFNIPY
DAEKIHGISTELAQQDGIPLKEVLEKFKHALSKTKFVVGQNVGFDINIMGAEFHRLTLAN
GLQSLPVLDTCTEKTAKLCQIPGGRGGKFKLPTLTELHQHLFGKAFGEAHNATADVEATT
RCFFELVRKQVFTIEELDVSPDYFDRFKEKNPTEIQLIGLRHINLKKASNKIRETFSEKE
KTKVSQQDIQQNLEVLDTVQFSHLHNHSQFSVLQSTSSIPDLIQVAVKNNMPAVAMTDHA
NMMGAFHFVQGVANHNKTIQLANKEALDKGELPKGKEIKPIIGCEFFVCENHQDKSRKDN
GYQIVLLAKNKNGYHNLAKMSSTAFVDGFYYVPRIDKEIIKKYKKDIIVLTGNLYGEVPS
KVLNIGEKQAEEALLWWHKEFGDDLYIEIMRHNQEDENRVNSVLVEFSKKHTIKLVATNN
TYYCEQADANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSQEEMKELFIDLPE
AIANVQEVVDKIESFELARDVLLPAFDIPKQFQFEEDLIDGGKRGENSYLRHITYEGAKK
RYGEITPEIDERLDFELKVIEKTGYPGYFLIVEDFIRAARKMDVSVGPGRGSAAGSAVAY
CLWITNLDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIEKYGSNQVAQIIT
YGTMAAKSSIRDTARVLDLPLGDADRISKLIPNMSKLGKIFGVDEATLKKKFRSDDLEKI
NELLKIADGNDLEAETLNQARVLEGSVRNTGIHACGVIITPDDITKFVPVALAKDSDMYC
TQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKAKHNVDLDPESFPLDDEETYALFQR
GETVGIFQYESPGMQKYLKELKPTVFADLIAMNALYRPGPLEYIPSFINRKHGKEEIIYD
LEACEEYLQETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQKAVLDKMKPKFIE
QASAKGHDEDRLEKIWKDWEAFAAYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKQVTFFMEECKRMKLDVLGPDVNESYRKFSVNKEGAVRFGMGAIKGVGTGAVATI
VENRKEEGPYRSIFDFAKRIDLRAANKKAFESLALAGGFDSFTDTHRGQYFHEEGDGITF
LEKAIRYGSKFQESENSSQVSLFGEASEVQIPEPIVPPCEEWGTMEKLAREKEVVGIYLS
GHPLDDFKYEMKYFCNATLQHFSDIENNINQELSFGGVITNVEHRTSKNGKGWAIFSIED
YNTAHEFRIFGEDYLKHRPFLVKSTFVYAKAFIKEGWTNRETGKKGDPRIQFNSFQLLHD
VMENYAKKLTIQLDINELSDSRIDQLKEVLTLNTGNHTLNFVIYEMAEQLKLHMPSRKQK
VNISPTLLDILENESIYYKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgatatttgacaccgaaactactggtttaccaaaacgatgggatgctcccata
actgattcggataactggcccagatgtatacaaatagcatggcagttgcacgatgcgatg
ggaaactgtatcgagcatcaagattatcttgtaaaaccagatgggtttaacattccctat
gatgcagaaaaaattcatggcatctctacagaattagcacagcaagatggcatcccacta
aaagaagttttagaaaaatttaagcacgcactatcaaaaacaaaatttgtagttggccaa
aatgttggctttgatatcaatattatgggtgccgagtttcatagactcaccttggcaaat
gggttacaatctttaccagtactggatacatgtacagaaaaaactgcaaaactatgtcag
ataccaggtggacgaggaggtaaatttaagcttcccactttaaccgaattgcatcaacat
ttatttggaaaagcttttggagaagcacataatgctacagcagatgtagaagctactaca
cgatgtttctttgaattagtgagaaaacaagtttttactattgaagaactagacgtctcc
ccagattattttgatcgttttaaagaaaaaaacccaaccgaaatacagcttattggtcta
cgtcatatcaatcttaaaaaagcctcaaataagattcgagaaacgttttcagaaaaagag
aaaacaaaggtatcacagcaagacatacagcaaaatctagaggttttagacactgttcaa
ttctcacatttacataatcattcacaattttcggtattacagtcaacctctagtatccca
gatttgatacaagtagccgtcaaaaataatatgccggcagtggcaatgacagatcacgct
aatatgatgggagccttccattttgtgcaaggagttgcgaatcacaataaaaccatccaa
ttagcaaataaagaagcgctagataaaggtgaattacctaagggtaaagaaataaaacct
attattggatgtgaattttttgtgtgtgaaaatcatcaagacaaatcccgaaaagataat
ggctatcaaattgttctcttagccaaaaataaaaatggatatcacaatcttgcaaaaatg
tcttctactgcgttcgtagatggtttttactatgttcccaggatagacaaagaaattatc
aaaaaatataaaaaagacattattgtacttactggcaatctatacggtgaggtacctagt
aaggttttaaatatcggggagaaacaagccgaagaggcattgttatggtggcataaggag
tttggagatgatttatacatcgaaattatgcgccataatcaggaagacgaaaatcgagtc
aactcggttcttgtagaattttccaaaaaacatactataaaacttgttgcgactaataat
acatattattgcgaacaagccgatgccaatgctcatgatattttattatgtgtaaaagat
ggtgagaaacaagcaacaccgattggtcgtggtcgagggtatcgatatggactgccaaat
caagaatactattttaagtcgcaagaggaaatgaaagagcttttcattgacctaccagaa
gcaatagcaaatgtacaagaagtagtagataaaattgaatctttcgaacttgcaagagat
gtactcttacctgcttttgatatcccaaaacagtttcaatttgaagaagatttgattgat
ggtggtaagcgaggtgaaaatagttatttacgtcatattacatacgagggtgccaaaaag
cgttatggtgaaataacccctgagatagatgaacgcttggattttgagcttaaagttatt
gaaaaaactgggtatcctggatactttttgattgtagaagattttatccgtgctgctaga
aaaatggatgtgtcagtagggcctggtagaggatccgctgctggttctgccgtagcgtat
tgcctatggatcaccaatctagatcctattaaatatgatttactttttgagcgttttctc
aatccagatcgtgtaagtatgcccgatatagatatcgattttgatgatgaaggtcgtagc
cgcgttatggattatgtaattgaaaaatatggatcaaatcaagtagctcaaattattacc
tatggaacgatggctgccaaatcttcaattcgtgatactgcacgagtacttgatttgcct
cttggagatgccgataggatatccaaactgattcctaatatgtcaaaacttggtaaaata
tttggcgtcgacgaagctactttgaagaaaaaatttagaagcgatgatcttgaaaagatc
aatgaattacttaaaatagcagatggcaacgatcttgaagccgagaccttaaatcaagcc
cgtgttcttgaaggctcagtgcgtaatactggaattcatgcttgcggggtaattatcacg
cccgatgatattacaaaatttgtacccgtagcactcgcaaaggattcagacatgtactgc
acacaatttgataactcagttgtggagagtgcaggtctgcttaaaatggattttttagga
ctcaaaacacttacactaattaaggacacagtcaaaattgtaaaagcaaaacataatgtg
gatctcgatcccgaaagttttccgcttgacgacgaagaaacttatgcgctctttcaaaga
ggagaaactgttggtatatttcaatacgaatctcccggaatgcaaaaatatttaaaagag
ctaaaacctaccgtttttgctgatttaattgcaatgaacgcactatatcgacctggtcca
ttagaatatatccctagttttattaatcgtaaacatggtaaagaagaaattatttatgat
ctggaagcttgtgaagagtacttgcaagaaacctatggaataacagtataccaagagcaa
gtaatgcttttatcacaaaaacttgcagattttacgaaaggtgaggcagatgttttacgt
aaagccatgggtaaaaaacaaaaggctgttttggataaaatgaaacccaaatttatcgaa
caagcctctgccaaaggccatgacgaggatagattagagaaaatttggaaggattgggag
gcctttgccgcctatgcatttaacaagtctcattctacttgctatgcctggattgcgtat
caaactgcatatcttaaggctcattatcctgccgaatacatggctgctgtgctatctaat
aacatgaatgatatcaagcaggttaccttctttatggaagaatgtaaacggatgaaactt
gatgtattaggacctgatgtgaatgagtcctatcgtaaattttcagttaataaagaagga
gcagttcgttttggtatgggcgcgatcaaaggtgtagggactggagcggtagccactatc
gttgaaaatagaaaagaagaaggaccttatcgctcaatctttgattttgccaaacgtatc
gacttaagagcggctaataaaaaagcgtttgaaagcttagcgcttgctggcggctttgac
tcttttaccgatacacatcgtggtcaatactttcacgaagagggtgatgggatcacattt
ttggaaaaagcaattcgctacgggtccaaatttcaagaaagcgaaaattcttcacaggta
agtctatttggtgaagccagcgaagtacaaatacccgaacccatagtacctccatgtgaa
gaatggggaactatggaaaaattagctagagaaaaagaagttgttgggatctacctctct
ggacatcctctcgacgattttaaatacgaaatgaaatatttttgcaatgcaactcttcaa
catttttctgatattgaaaacaatattaatcaagaattatcctttggaggtgttattaca
aatgtagaacatcgtacttcaaaaaatggaaaggggtgggctatttttagcatagaagac
tacaataccgcacatgagtttagaatttttggagaagattacttaaaacatagacctttt
ttagttaaaagtacgtttgtatacgccaaagcctttataaaagaaggctggaccaaccga
gaaacgggaaaaaagggagatcctcgtattcaattcaatagttttcaattattgcacgat
gtgatggaaaactatgccaaaaaattgactatccaattagacattaatgaattatctgac
tcccgaattgatcaattaaaagaggtacttaccttaaacacgggtaatcatacattaaat
tttgttatttacgaaatggcagagcagcttaaacttcatatgcctagtcgtaagcaaaag
gttaatatatcaccaactctattagatattttagaaaatgaatccatctattataaatta
aactaa
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