Psychromicrobium lacuslunae: UM93_01585
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Entry
UM93_01585 CDS
T03775
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ari
Psychromicrobium lacuslunae
Pathway
ari03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UM93_01585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ari03019
]
UM93_01585
03016 Transfer RNA biogenesis [BR:
ari03016
]
UM93_01585
Enzymes [BR:
ari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UM93_01585
Messenger RNA biogenesis [BR:
ari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UM93_01585
Transfer RNA biogenesis [BR:
ari03016
]
Prokaryotic type
tRNA degradation factors
UM93_01585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
PCB_OB
KH_KhpA-B
MUG2_C
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AJT42782
UniProt:
A0A0D4C272
LinkDB
All DBs
Position
340012..342285
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AA seq
757 aa
AA seq
DB search
MEGPEIQFAEAVIDNGRFGKRTIRFETGRLAQQAAGAAMVYIDDDTALLSATTAGKQPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFVKGLRNEVQ
IVVTVLAINPDELYDVVAINASSMSTQLSGLPFSGPIGGVRVALIADQNGGSQWVAFPRH
SELENAVFDMVVAGRVAGDDVAIMMVEAEATDNSWKLIKENGATAPTEEIVAEGLEAAKP
FIKVLCEAQADLAARAAKPIVEFPIFLDYEQDAYDAVETAAASKLAEVFQIADKQERDNA
SDALKDEVVGQLAEQFEGREKELSAAFRSVTKKVVRQRILKDQVRIDGRGLTDIRQLTAE
VEVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPEKTKRYMHNYNFPPYSTGET
GRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLSL
LNAGVPLKAPVAGIAMGLVSDEVDGQTRYAALTDILGAEDAFGDMDFKVAGTSEFVTAIQ
LDTKLDGIPASVLAAALKQAREARLHILGVLNAAIDVPDELSEFAPRVIAVKIPVDKIGE
VIGPKGKMINQIQEDTGADISIEDDGTVYIGATDGPSADAARSAINAIANPQVPEIGERY
LGTVVKTTTFGAFVSLTPGKDGLLHVTELRKINDGKRVDNVDDVVSVGQKIQVEITKIDD
RGKLSLSPVIAEAEGEATEAVAEAAAAEAEAADVQAN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
ttggagggtcccgaaatccaattcgccgaagccgtgatcgataacggtcgctttggcaaa
cgcactatccgctttgaaaccggtcgtttggctcagcaggccgccggcgccgcgatggtt
tacatcgacgacgacactgcgctgctctccgccaccaccgcgggcaagcagccgcgtgaa
ggcttcgacttcttcccgctcaccgtcgacgtggaagagcggatgtacgccgctggccgg
atccccggttcgttcttccgtcgcgaaggccgtccctcaaccgaggccatcctggcttgt
cgtctgatggaccgcccgttgcgccccgccttcgtgaagggcctgcgcaacgaagttcag
atcgtggtcaccgtgctcgcgatcaaccccgatgagctgtatgacgtggtcgctatcaac
gcttcctcgatgtccactcagctttccggtctgccgttctccggcccgattggcggcgtc
cgcgtcgctctgatcgcagatcagaatggtggcagccagtgggttgccttcccacggcac
tccgaactggagaacgccgtcttcgatatggtggttgccggtcgagttgctggcgacgat
gtcgcgattatgatggtcgaggcagaggcgaccgataactcctggaaactgatcaaggaa
aacggtgccaccgcgccgaccgaagagatcgttgccgagggcctggaagcggctaagccg
ttcatcaaggtgctttgcgaagcgcaggctgatttggccgctcgcgccgccaagccgatc
gtcgaattcccgatcttcctggattacgagcaggatgcttacgacgccgttgagaccgct
gccgcgagcaaactcgccgaggtcttccagatcgccgataagcaggagcgggacaacgcc
tctgacgcactcaaggacgaagtcgttgggcagctggccgagcaattcgaaggccgtgag
aaggagctttccgcagccttccgctcggtcaccaagaaggtggtgcgccagcgcatcctg
aaggaccaggttcgcatcgacggccgtggcctgaccgatattcgccagctcaccgccgag
gtcgaggtgctgcctcgagtgcacggttcggcaatcttcgagcggggtgaaacccagatc
atgggcgttaccacgctgaacatgctcaagatggaacagcagatcgactcgctctccccg
gagaagacgaagcggtacatgcacaactacaacttcccgccctactcgaccggtgaaacc
ggccgggttggctcgcccaagcgccgtgaaatcggccacggtgctctcgctgagcgtgcc
ctggtgccggtgctgccctcgcgtgaagagttcccctacgcgatccgtcaggtctccgag
gcgctcggctccaacggttcgacctcaatgggctcggtctgcgcttcgacgctgtcgctg
ctcaacgccggtgtgccgctgaaggctccggttgctggtatcgcgatgggcctggtgtcc
gacgaggttgatggccaaacccgttacgccgcgctgaccgacatcctgggcgctgaagat
gctttcggcgatatggacttcaaggtggctggcacctccgagttcgttaccgctattcag
ctcgacaccaagctcgatggcatcccggcctccgtcttggctgccgcgctcaagcaggct
cgcgaagcccgcttgcacattctcggcgtgctcaacgctgcgatcgacgtaccggatgag
ctctctgagtttgcgccccgcgttatcgcggtcaagatcccggttgacaagatcggcgag
gtcatcgggcccaagggcaagatgatcaaccagatccaggaagacaccggcgcggatatc
tccatcgaggatgacggcacggtgtacatcggggccaccgacggcccctcagctgacgct
gctcgttccgcgatcaacgcgatcgccaacccgcaggttcccgagattggtgaacgctac
ctgggcacggttgtcaagaccaccacctttggtgctttcgtctcgctgaccccgggcaag
gacggcctgttgcacgtcaccgaattgcgcaagatcaacgatggcaagcgggttgacaac
gtcgacgacgtggtctccgtcggtcagaagatccaggtggaaatcaccaagatcgacgac
cgtggaaagctctcgctctcgccggtaatcgcggaagctgagggcgaagctacagaagcc
gttgccgaggccgctgcggccgaggcagaggctgccgacgttcaggccaactaa
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