KEGG   Psychromicrobium lacuslunae: UM93_03105
Entry
UM93_03105        CDS       T03775                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
ari  Psychromicrobium lacuslunae
Pathway
ari02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ari00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    UM93_03105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ari03021]
    UM93_03105
Transcription machinery [BR:ari03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     UM93_03105
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AJT40761
UniProt: A0A0D4BXC2
LinkDB
Position
682394..683770
AA seq 458 aa
MSPTARKASTATVSATPEEPAKKQTTTRTSNAPKALVTPAGRKPAGKVVPVEEAPEKLTP
AKKRAATAAAKKTTADTETPKATRGRKPKADSESEEAEVKVEDLEVSEETEEPEEVTEEG
LAEVAEVAEEATGSGFVYSDADDDDAPVQQVMSAGATADPVKDYLKQIGKVALLNAEQEV
DLALRIEAGLYAEEKLAADDGKIAEKLKREYQWVIHDGKRAKNHLLEANLRLVVSLAKRY
TGRGMLFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPV
HMVEVINKLARVQRQMLQDLGREPTPEELALELDMTPEKVVEVQKYGREPISLHTPLGED
GDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVAMRFGLTDGQPKTLD
EIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1377 nt   +upstreamnt  +downstreamnt
gtgtctccaaccgcacgtaaggccagcacagccaccgtgagcgctacccccgaagaacct
gccaagaagcagacgacaactcgaaccagcaatgcgccgaaggctcttgtcactccggcc
ggacggaagcccgcgggcaaggtagttcccgtcgaggaagccccggagaaactcactccg
gcgaagaaacgtgccgcaaccgcagcggctaagaaaaccactgccgacaccgaaacccct
aaggccacccgaggccgtaagccaaaggctgattcggagagcgaagaggccgaggtcaag
gtagaggatctcgaagtcagtgaagagactgaggaaccggaagaagtaaccgaagagggc
ctcgcagaagtcgctgaagttgctgaagaagcgacgggctcgggttttgtttattcagac
gccgacgatgacgatgcgccggtccagcaggtaatgtcggcgggtgccaccgctgacccg
gtcaaggactacctgaagcagatcggtaaagtggcgttgctcaatgcggagcaagaagtc
gacctggcgctacgcatcgaggcgggcctgtacgctgaagaaaagctggccgccgatgac
ggcaaaattgccgagaagctcaagcgcgaataccagtgggttatccatgatggaaagcgc
gccaagaaccatctgctggaggccaatctccgactcgtggtttcgctggccaagcgttac
acgggccgcggcatgcttttcttggaccttatccaggaaggtaacctgggcctgatccgt
gccgtcgagaagtttgactacaccaagggcttcaagttctcgacctacgccacctggtgg
atccgtcaggccatcactcgggcgatggctgatcaagctcggaccattcgtattccggtg
cacatggtcgaagtgatcaataagctcgccagggtgcagcgccagatgctgcaggacctg
ggccgtgaaccaacgccggaagagctggccctggagctcgatatgacccctgagaaggtg
gtcgaggtgcagaagtacggtcgagagccgatttccttgcacacgccgctgggtgaggat
ggcgactctgaattcggcgatctgatcgaggactcggaagccgtggttcctgccgacgcg
gtgagcttcaccctgctccaggagcaactccactcggtactcgacacgctttccgagcgt
gaagctggcgtggtcgcaatgcgtttcgggctcaccgacgggcagccgaagactttagac
gaaatcggcaaggtttacggcgtcactcgcgaacgaatccgacagatcgaatcgaagacc
atgtcgaagctacggcatccttcgcgttcgcaggtactgcgcgactacctcgactaa

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