Psychromicrobium lacuslunae: UM93_03375
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Entry
UM93_03375 CDS
T03775
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ari
Psychromicrobium lacuslunae
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ari03016
]
UM93_03375
Enzymes [BR:
ari01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
UM93_03375
Transfer RNA biogenesis [BR:
ari03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
UM93_03375
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
MCD_N
Motif
Other DBs
NCBI-ProteinID:
AJT40794
UniProt:
A0A0D4BWU8
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All DBs
Position
complement(744330..745706)
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AA seq
458 aa
AA seq
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MSPADQQDSPTKRSRDRSQRTARVKPEAIPASPESAEIADLDLSEIPEVIELDTPRDGVP
LVINTAEGLSRAAKALAAGTGPAGVDAERASGFRYGQRAFLVQIRREGAGTWLIDPEPFE
DLKIIDEALRGVEWILHAASQDLPCLYDLGMWPDSLFDTELAARIAGLPKVGLAAVVEQL
LGFGLAKEHSAADWSTRPLPEPWLRYAALDVEVLAELREELVELLTADGKLEWVNEEFHA
ILQVGPPAPRVDPWRRTSGVHQLRDRRQLAAVRQLWQERDALAQNRDVAPGRLLPDSAIV
VAAKAMPNTIPQLLAVPGFNGRAVHREAPRWMRAINEAKALKELPPLHLPSNAPPPPRAW
TDKDPAAAARLATARPRLAALAKDLKLPVENLLTPDFLRRLCWRPPELFELESIAAALAD
LGARGWQIKLTAPLLVEAFNHPDPLPNKDATAEGSASN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgagtccagctgaccagcaggactccccgacgaagcgcagccgggatagatctcagcga
acagctagggtgaagcccgaagctatccccgcgagtccagaaagcgccgaaatcgctgac
cttgatctgagcgagatacccgaagtcattgaactagacaccccccgcgacggggtgcct
ttagtgatcaataccgctgaagggctatcccgggccgctaaagccctggcggctggcact
ggaccagcgggtgttgatgccgagcgggcttctggattccgttacggccagcgcgccttc
ttggtgcagattcggcgggaaggcgctggcacttggctgattgatccggaacctttcgag
gatctcaaaatcatcgatgaagccctccgtggcgtggaatggatccttcatgcggccagc
caagatctgccctgcctctacgacctagggatgtggcctgactcgctctttgataccgag
ttagctgctcggatcgcggggctacccaaggtaggcctagccgcagtggtcgaacaattg
ctgggttttggactagccaaagaacattcggccgccgactggtcgactcgcccgctgcca
gagccctggttgcgctacgccgcactcgacgtcgaggtgctggccgaattgcgcgaggaa
ctcgtcgagttattgaccgctgatggcaagctcgaatgggtcaatgaggaattccatgcc
attctgcaggtcggaccgccagcgcctcgcgttgatccgtggcggcgcacctccggggtg
catcagctccgggaccggcgtcagctcgccgcggttcgccagctctggcaggaaagagac
gccctggcccagaaccgtgatgtcgccccgggccgattgctgcctgattcggccatcgtg
gttgccgctaaagcgatgccgaatacgattcctcagctgcttgcggtgcccggctttaat
ggccgcgcagtgcaccgggaggcacctcgctggatgcgcgccattaatgaggcaaaggct
ctcaaagaattaccgccattgcatctgcccagcaatgcgccgcccccgccgcgtgcctgg
acggataaggatcctgctgcggctgccagattggcgaccgcccgtccccggctggctgcg
ctcgccaaggatctcaagctgccagtagagaacctgctcaccccggacttcttacgcaga
ttatgttggcgcccacctgagctatttgagttggagtcaatcgctgccgcacttgccgat
ttgggcgcccggggctggcagatcaagctgactgccccgcttctagtagaggccttcaac
cacccagatccgctgccaaacaaggacgccacggccgaaggttcagcgagtaactag
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