KEGG   Psychromicrobium lacuslunae: UM93_03680
Entry
UM93_03680        CDS       T03775                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ari  Psychromicrobium lacuslunae
Pathway
ari03030  DNA replication
ari03410  Base excision repair
ari03420  Nucleotide excision repair
ari03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ari00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UM93_03680
   03410 Base excision repair
    UM93_03680
   03420 Nucleotide excision repair
    UM93_03680
   03440 Homologous recombination
    UM93_03680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ari03032]
    UM93_03680
   03400 DNA repair and recombination proteins [BR:ari03400]
    UM93_03680
Enzymes [BR:ari01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UM93_03680
DNA replication proteins [BR:ari03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     UM93_03680
DNA repair and recombination proteins [BR:ari03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     UM93_03680
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UM93_03680
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_5 DNA_pol_lambd_f Mt_ATP_synt HHH DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AJT42853
UniProt: A0A0D4C2M1
LinkDB
Position
798766..801423
AA seq 885 aa
MAFRAFYALPPETFVIDTGQHTNAVHGFTSMLLTMIRQQKPSHVVVAFDLDTPTFRSEEY
SEYKGGRNKTPEEFGGQVDLIIKVMEAMNVPTISLDGYEADDIIATLATQSEQAGWQTLV
VSGDRDAFQLITDNTLVLYPKKGISDIPPMDAAAVQEKYFVSPAQYSDLAALVGETADNL
PGVPGVGPKTAAKWINQYGGLEGILENLDAIGGKVGDALREHVESVKRNRRLNHLLRDLE
LPVTLDQMELKHPNREKVEELFDALQFKTLRKRLFDQFGEDAEDGPDPEHQLPVHVVLGS
ETELSAWLKDAVGQRVGLALLGDQLPIVDPVGLDVRALALSTENKAAFVPLEGLDAAAEK
VLADWLSSSDPKAVHDAKAAYKALSGRGLALAGVVDDTSISSYLIQPERRNYELADLSLY
YLKSHLGVGEGKPSGQLDLGLEGDADATEAVARAFATERLSAELEPLLVERGADKLLSSL
ELPLQRTLAEMELAGVAIDKGILDTLMADFTTTIEAAQSEAYELIGHEVNLGSPKQLQTV
LFEELEMPKTKKIKTGFSTDAEALTDLMAKSPHPFLQQLQIYRDATKLRQTVEGLLKSIG
SDARVHTTYAQNIAATGRLSSNNPNLQNIPIRSEEGRRIRSAFVVGQGKARQRYETLLTA
DYSQIEMRIMAHLSGDQALIQAFKDGEDLHRFVGSHIFNVEPQDVTSAMRSKVKAMSYGL
AYGLSSFGLSKQLNISVDEARTLMKDYFDRFGAVRDYLRGVVEQARVDGYTETIEGRRRY
LPDLTSDNRHLREIAERVALNSPIQGSAADIIKRAMLGVDKAIAESGLKSRMLLQVHDEL
VLEVAPGELAQLQVLVPEQMAGAAELSVPLDVQLGVGESWFDAGH
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggctttccgtgccttttacgcactgccgccggagacctttgtgattgacaccgggcag
cataccaacgccgtgcacggcttcacctcaatgctgctgaccatgatccggcagcagaag
ccaagccatgtggtggtggctttcgacctggacaccccgacctttcgctccgaagagtac
agcgagtacaagggcggccggaataagacacccgaggaattcggtggccaggtcgacctg
atcattaaggtgatggaggcgatgaacgtgccaaccatcagtctcgacggttatgaagcc
gatgacattatcgccaccctggccacccaatcagagcaggccggctggcagaccctggtg
gtttccggtgatcgtgacgccttccaactgatcaccgacaacaccctggtgctctacccc
aaaaaaggcatttcagatatcccaccaatggatgccgcagcggtacaggagaagtatttt
gtctcgcccgcccaatactcggatctggccgccctggtgggggagacagcagacaatctt
ccgggcgtcccgggagtcggccccaaaacagccgctaaatggattaaccagtacggcggg
ctggaaggcatcctggaaaatctcgatgctattggtggcaaggtaggcgacgcgctgcgc
gaacacgtcgagagtgtgaagcgtaatcgtcggctaaatcacttgctgcgcgatctcgag
ttgccggtgactctcgatcagatggaactgaagcatccgaaccgggaaaaagtagaagaa
ctcttcgacgcgctgcaattcaagacactgcggaagcggctctttgaccagttcggcgag
gacgccgaggacggcccggatcccgagcatcagcttccggtgcacgtggtgctgggcagc
gaaacggaacttagtgcttggctgaaagacgctgtcgggcagcgggtcggtttggcatta
ttgggcgatcagctgccgatcgtcgacccggttggcctcgatgtgcgggctttggcactc
agcaccgaaaacaaagcggcctttgtgccgctagaggggctggacgctgctgccgagaag
gttcttgccgactggctttcgagcagcgaccccaaagcggtgcacgacgctaaggcagcc
tataaggcgctttccggacgtggcctggcgctggcgggcgtggtggatgacacttcgatt
tcgagctatctgattcagcctgaacggcgtaattatgaactggctgatctcagcctctac
tacctgaagtctcatctgggagtcggcgagggcaagccgtccggtcagttagacctaggc
ttggagggcgacgccgatgctaccgaggcagtggccagagcctttgctaccgagcggctc
agcgctgaattggaaccgcttttagtggagcgaggggcggataagctgctcagcagcctg
gaattgcctttgcagcgtacccttgccgagatggagttggccggggtggcgattgataag
ggcatcctggataccttgatggccgatttcaccaccaccattgaggcggcgcagagcgaa
gcttatgaactgatcggccatgaggtgaacttgggatcgcccaagcaactgcagacggtg
ctctttgaagagctcgagatgccgaaaaccaagaagattaagaccggtttctccaccgat
gccgaagcgctaaccgatctgatggcgaagagcccgcaccctttcctgcagcagttgcag
atctatcgtgatgccaccaagcttcggcagacggtggagggcctgctgaagtcaatcggt
tcagatgctcgggtgcacactacttacgcgcagaacatcgctgctaccgggcggctctct
tcaaacaacccgaatctgcagaacatcccgatccgcagtgaggaaggtcggcgaattcgc
agtgccttcgtggtcggccaaggcaaggctaggcagcgttatgagaccctgctgaccgct
gactattcgcagattgaaatgcgaatcatggcccatctctccggcgatcaggcgctcatc
caggcttttaaggacggcgaagatctgcaccgctttgtcggttcgcatattttcaatgtg
gaaccacaagacgtcacctcggcaatgcgctctaaggtgaaggcaatgtcttacggcctg
gcctatggtctgagttccttcggactgtccaaacagctgaatatctcggtcgacgaggcg
cgcaccctgatgaaggattacttcgaccgttttggtgcggtgcgcgattatttgcgtggc
gtggtggaacaagcccgagtggatggttacaccgaaaccattgaaggccgtcgtcgatac
ttgccggatttgaccagcgacaatagacatctgcgtgaaattgccgagcgggtggcgctc
aattcgccgattcagggctcggccgcggacatcattaagcgagccatgctgggcgtggat
aaggcgattgctgagagcggactgaaatcacggatgctgctgcaggtgcacgatgagttg
gtgcttgaagttgctccgggagaattagcacagctacaagttttggtgccggagcagatg
gccggagcggctgagctgtccgtccccttggacgttcagctcggtgtcggggagagctgg
ttcgacgccggtcactaa

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