Psychromicrobium lacuslunae: UM93_04940
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Entry
UM93_04940 CDS
T03775
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ari
Psychromicrobium lacuslunae
Pathway
ari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UM93_04940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ari03400
]
UM93_04940
DNA repair and recombination proteins [BR:
ari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UM93_04940
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
UM93_04940
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
AJT41023
UniProt:
A0A0D4BXI6
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Position
1078446..1079201
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AA seq
251 aa
AA seq
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MSGRSSFAAHTYRVDAVVLRTHKLGEADRIITLLSSERGQIRAVAKGVRRTSSKFGGRLE
PFMVSDLQLVSGRTLDIISQAVTKSPYGQSIAAHYDRYTVATAMAETAEKLTDADAESAG
AQYRLLVGALGALARGEHAAELILDSYLLRALATAGWAASFDACARCGTEGPHSAFSAAL
GGAVCHDCRPPGSPSPAVQTMSLLAALLSGNWSVADNSEPAHRREAAGLVASFVQWHLER
NVRSLRLVERN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggtcgttcctcatttgctgcgcacacctatcgggtggacgccgtggtgctgcgc
acccacaaactgggggaggccgatcggatcatcactctgctgagcagcgaacgcggtcaa
attcgggccgttgccaagggagtgcggcgcacttcaagcaaattcggcggaagacttgaa
ccgttcatggtttcagacttgcaactggtctctggtcgtaccttagacatcatttcccag
gcggtcactaagagcccctacggccagtcgatcgcggctcactacgatcgctataccgtg
gccaccgcgatggccgagacagctgaaaaactgaccgacgccgatgccgaatcggcgggc
gcacaataccggttgctggtaggcgcactcggagcccttgcccgtggtgagcacgcggcg
gagttgatcctggactcttacttactgcgcgccctcgccaccgctggctgggcggcaagt
tttgatgcctgcgcgcgctgcggcaccgaaggtccgcactcggcgttttcggcggcgctt
ggcggcgcggtctgtcacgactgccgaccacccggatcgccatccccggctgttcagacc
atgagcctgctggcggcgttgttgagcggtaactggtcagtggcggataactccgaaccc
gctcatcgtcgggaggccgcaggcttggtggcaagttttgtgcaatggcatcttgaacgg
aatgtccgttctttgcgtttggtcgagagaaattag
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