Psychromicrobium lacuslunae: UM93_05960
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Entry
UM93_05960 CDS
T03775
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ari
Psychromicrobium lacuslunae
Pathway
ari03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
UM93_05960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ari03019
]
UM93_05960
03009 Ribosome biogenesis [BR:
ari03009
]
UM93_05960
Messenger RNA biogenesis [BR:
ari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UM93_05960
Ribosome biogenesis [BR:
ari03009
]
Eukaryotic type
Pre-60S particles
RNases
UM93_05960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF7962
DUF2476
Motif
Other DBs
NCBI-ProteinID:
AJT41174
UniProt:
A0A0D4BXZ4
LinkDB
All DBs
Position
1282163..1282744
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AA seq
193 aa
AA seq
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MTGLDLAADALIEVAVLVTDSELNILGDGVDVVIKPDDAALAQMNDFVRQMHTTSKLLDE
LPHGSSMKEAEDKVLAYITEHVPDPGKAQLGGNTVGTDRGFLARDMPRVIEHLHYRIIDV
STIKELARRWYPRAYFQSPAKLGGHRALGDIVDSINELRYYREAVFVPAPGPDTATSQQI
SASVMSTASKAVD
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggctcgacttggcagctgatgcgctcattgaagttgccgtgctggtaaccgat
tctgagctcaatattcttggtgatggcgtcgacgtggtgatcaaacctgacgacgccgcg
ttagcgcagatgaacgatttcgtcaggcagatgcacaccacctcgaagttgctagatgag
ctccctcacggtagcagcatgaaagaggccgaggacaaggtgctcgcctacatcaccgag
cacgttccggatccgggtaaagcgcagctcggtggtaatactgtaggcaccgaccggggc
ttcctggcccgagatatgcctcgggtgatcgaacatttgcactatcgaatcattgacgtt
tcaacaattaaggaactggcacgacgctggtaccctcgcgcttacttccagtcgccggcc
aaactcggcggacaccgcgcgctgggcgatatcgtcgactcgatcaacgaactgcgctac
taccgagaggcagtttttgtacccgcgcccggcccggataccgcgacatcacaacagatt
tcagcctcggttatgagcaccgcctcgaaagctgtagactaa
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