Psychromicrobium lacuslunae: UM93_08330
Help
Entry
UM93_08330 CDS
T03775
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ari
Psychromicrobium lacuslunae
Pathway
ari03420
Nucleotide excision repair
ari03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UM93_08330
03430 Mismatch repair
UM93_08330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ari03400
]
UM93_08330
Enzymes [BR:
ari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UM93_08330
DNA repair and recombination proteins [BR:
ari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UM93_08330
MMR (mismatch excision repair)
Other MMR factors
UM93_08330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
PHDvar_NSD
Motif
Other DBs
NCBI-ProteinID:
AJT42987
UniProt:
A0A0D4C2S2
LinkDB
All DBs
Position
complement(1793387..1795528)
Genome browser
AA seq
713 aa
AA seq
DB search
MRPGTELSLEERVLSGLDEEQRLVASTLTGPLCVLAGAGTGKTRAITHRIAYGVHSGVYQ
PQRLLAVTFTARAAAEMRSRLRDLGVGSVQARTFHAAALRQLQFFWPQAIGGELPQLLEH
KAAIIAESARRLRLSTDRATVRDLAAEVEWAKVSMLTPETYLEHAQGRGTPGGFDLLTMS
RVFQSYEDVKTDRNLIDFEDVLLITVGILQEDDRVAATVREQYRHFVVDEYQDVSPLQQR
LLELWLGGREELCVVGDASQTIYSFTGASARHLLDFGRRYPNAQLVKLVRDYRSTPQVVQ
LANNLLAARRPAGRQADAAWSQPLQLVAQRPAGPAPSFVECSDDEAEAAAIAKGIGALIE
AGTQPAQIAVLFRTNGQSEAYEQALSAAGIGYQLRGGERFFARKEVRDAILSLRAASRAD
QTSDHDDQPAVALAQQVRDVLASIGFTEQAPAGGGAVRERWESLAALVALADELVVSRGA
EFRLADFVAELQERSAVQHAPTVQGVTLASLHSAKGLEWDAVFLVGLSEGLMPISFADTA
EAVDEERRLLYVGITRAREFLSLSWSLSRTPGGRANRKPSRFLDGLRPQSAVSRGAASQS
PRRQRAVAKPPALCRVCGKALSSGAERKIGRCAECPPSYQEATFEALRQWRLEEARSAQL
PAFMIFTDATLVAVAESEPASLEELSAVAGVGPSKLERYGAAVLQVMSDQQQA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ttgaggcccggcaccgaactgagtcttgaagaacgagtgctttccgggctggatgaagag
cagcgtctggtggctagtaccttgaccggaccattgtgcgtgctggccggggctggcacc
ggtaaaactcgggcgatcacgcatcgcattgcctatggcgtgcacagcggtgtctaccag
ccgcagcgactgcttgcggtgacctttaccgctcgagcggccgccgagatgcgcagtcgg
ctccgtgacctgggtgtcggctccgtgcaggcgcgaacttttcatgccgcagcgctgcgg
caactgcaattcttctggccgcaggcaatcggcggcgagctgccccagctcttagaacac
aaagctgcgatcattgccgaatcagcccgcaggttgcggctcagcaccgaccgggcaacg
gtacgggatctagcggcggaggtggaatgggccaaggtatcaatgctgacgccggagacg
tatctggaacatgcacagggtcgggggaccccaggtggctttgatctgctcaccatgtca
cgggttttccagtcctatgaagacgtcaaaacggatcgaaacctcattgactttgaggac
gtactgctgatcacggtcggcattttgcaggaagacgatagggtcgcggctaccgttcgt
gagcagtatcggcactttgtggttgacgaatatcaggatgtttcaccgctacagcaacgc
ttgcttgagttatggctgggaggacgcgaggaactctgcgtggtgggtgatgcctcgcag
acgatttactcctttaccggggcgagcgctcggcacctactcgacttcggccggcgctac
cccaacgcccaattggtgaagctggtgcgtgactatcgatctaccccgcaggtggtgcag
ctggccaataacctactggcagcccgtcgtccagcgggtcggcaggccgatgcggcgtgg
tcacaacccctgcaattggtggcacaacggcccgctggtccggcaccgagcttcgtggag
tgcagtgatgacgaggcagaggccgcagcgatagccaaggggatcggggcgctgatcgag
gccggaacgcagccagcgcagattgccgtgctgttccgcaccaacggtcaatccgaggcc
tatgaacaagcgctgagtgctgccggaatcggctatcagctccgcggcggcgaacgtttc
ttcgcacgcaaagaagtgcgcgatgcgattttgtcgttacgagccgcctcccgggccgat
cagacctcggatcatgacgatcaacccgctgttgcactggcacagcaggtccgggacgtg
ctcgccagtatcggtttcaccgagcaagccccggccggtggtggcgcggtgcgtgaacgt
tgggaatcgctggcggccttggttgccttggcagatgaattggtggtgagcaggggagcg
gagttccggctggcggattttgtcgctgaattgcaagaacgctcagccgtgcagcatgct
ccgacggtgcaaggcgtcaccctagcttcccttcattcggcgaagggcttggagtgggat
gcggttttcctggttgggctcagtgaagggctaatgccgatcagcttcgctgatactgcg
gaagcggtggatgaggaacgccggttactctatgtcgggatcactcgggcccgcgagttc
ctctcgctcagctggtcgctatcccggacgcccggcgggcgggcgaaccgaaaaccctca
aggtttctagacgggcttcgtccgcagagtgcggtgtcgcggggcgctgccagtcagtca
cctcgccgacagcgcgcagtcgctaagccgcccgcgctctgccgggtctgcggtaaagcg
ctgagcagtggtgcagaacgcaaaatcggccgttgcgcggaatgcccgccaagctaccag
gaagccaccttcgaggcactgcgtcaatggcgtcttgaggaagcgcgtagcgcgcagttg
ccagccttcatgatcttcaccgatgcgaccctggtggcggtggcggagagtgaaccagcc
tcactcgaagaactttcggcggtcgccggtgtcggtccgtccaaactggagcgttacggt
gctgcggtgctgcaggtgatgagtgatcagcaacaagcctga
DBGET
integrated database retrieval system
