Psychromicrobium lacuslunae: UM93_11205
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Entry
UM93_11205 CDS
T03775
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ari
Psychromicrobium lacuslunae
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ari03032
]
UM93_11205
03400 DNA repair and recombination proteins [BR:
ari03400
]
UM93_11205
Enzymes [BR:
ari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UM93_11205
DNA replication proteins [BR:
ari03032
]
Prokaryotic type
DNA Topoisomerases
UM93_11205
DNA repair and recombination proteins [BR:
ari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UM93_11205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AJT43065
UniProt:
A0A0D4C3V8
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All DBs
Position
complement(2375890..2378592)
Genome browser
AA seq
900 aa
AA seq
DB search
MVIVESPAKGKTIAGYLGAGFEVEASYGHIRDLPQPSDLPAELKKTSVGKFAVDLDNDFE
PYYVVPSDKKKRVAELKAALKGADELYLATDGDREGEAIAWHLLEVLKPKVPVYRLTFPE
ITKEAIQRAMNELRDVDMPMVDAQETRRVLDRLYGYEISPVLWRKVSRGLSAGRVQSVAT
RLVVERERERMAFRSASYWDVLGEFSTTESAQAFKAKLVAVDGARVATGRDFNDSGALTA
SKVAHLDQASATALADGLEQAEFAVRSVEHKPYTRRPAAPFTTSTLQQEAARKLRFSARV
TMRVAQSLYENGYITYMRTDSVALSDQAISAARRQAAELYDPSFVPNAPRIYSNKSKNAQ
EAHEAIRPAGDSFRVPAQVARSLSSDEFKLYELIWKRTVASQMADAKGSTASVRLGAKSA
EGRDAEFAASGTVITFQGFLAAYEEGKDEARQSDEANAADGGRLPNLAVADALQTESLEP
QGHETSPPPRYTEASLVKTLEERGIGRPSTYAATISTIMDRGYVSQRGSALVPSWVAFSV
VRLLEQHFENYVDYDFTAEMEEDLDRISRGEETGSHWLKLFYFGADDGSGLLPIVDNLGE
IDAREINSVPIADGITLRVGKFGPYLEKPVPADAPEGTEPERANVPEDLAPDELTAEKAI
ELINTAAPEERVLGVDPESGHTVVAKNGRYGAYVTELIPEPSAEELANAPVEYYKNGKPK
PPKKPVKAKPRTGSLFASMSVETVTLEEALQLMSLPRVLGADAEGVEITVQNGRFGPYLK
KGTDSRSIGSEEEIFTITLEQALEIYSQPKQRGTRAAVPPLAEFGEDPTSGKKIVVKEGR
FGPYITDGETNITVPRGTSIEELTRERAIELLADKRARGPVKRTSSRAKTSTKRKTAAKR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
ctggtcattgtagagtctccggcaaagggaaaaactattgccggttatcttggcgcgggc
ttcgaagtcgaagcctcctacggccacatccgcgacttaccgcagccttctgacctaccc
gctgaactgaagaagacttcggtgggcaagttcgcagtcgatctcgacaacgatttcgaa
ccgtactatgtggtgccctccgataagaaaaaaagggtcgccgaactcaaagccgcactc
aagggtgccgacgaactctatctggcaactgacggtgaccgcgaaggtgaggcgattgcc
tggcatctcctcgaggtgctcaaaccgaaggtcccggtttaccgcttgaccttcccggaa
atcaccaaagaggcaatccagcgcgccatgaacgaactgcgcgatgttgatatgccgatg
gtcgatgcccaggaaacccggcgcgtgctggaccggctttacggctacgagatttctcca
gtgctctggcggaaggtttcccgtggtctctccgccggtcgggtgcaatcggtggcgacc
cggttggtggtggagcgggaaagagagcggatggcgttccgttcagcgtcctactgggac
gtgctcggtgagttctccaccacggagtcagcccaggctttcaaggccaagctagttgct
gttgacggtgcccgggttgccaccggccgagattttaacgattccggcgcgctgaccgcg
agcaaggttgcgcacttagatcaggcgagtgcaactgccctcgccgatggcttagagcag
gccgagttcgccgttcgctcagtagaacacaagccctacactcgccgcccagcagcgccc
ttcaccacctcgacgctgcagcaggaggctgccaggaagcttcgattctcggcacgggtg
accatgcgggttgcgcaaagcctttatgaaaacggctacatcacctatatgcgtactgac
tcggtggcgctcagtgatcaggcaatcagtgcggctcggcgtcaagccgctgaactctac
gatccctcgttcgtgccgaatgccccgcggatctactcgaacaagtcgaaaaatgcccag
gaagcgcacgaagcgattcgtcccgcgggtgactctttccgggtgccagcgcaggtcgct
cgctcattgagttccgatgagttcaagctgtacgaactgatctggaagcgcacggtggct
tctcagatggctgatgccaaaggctccaccgcctcggtgcgtctcggcgcaaagagtgcg
gagggccgggacgcagaattcgcggcttctggcacggtgatcaccttccaaggcttccta
gccgcttacgaggaaggcaaggacgaggcgcggcagagcgacgaagcaaacgcggccgac
ggcggcagactgccgaacctggcggtcgccgatgcgctgcagaccgagagcctggaaccg
cagggacacgagacctcgccaccaccgcgatacaccgaagcttccctggtgaagactctg
gaagaacgtggcattggccgcccttcgacctatgcagcaacaatttccaccattatggac
cgcggctatgtcagccagcggggttcggccctggtacctagctgggtggctttttcagtg
gtccggttgcttgagcagcacttcgagaactacgtcgattacgatttcaccgctgaaatg
gaagaggacctggaccggatctcgcgcggcgaagaaaccggttcgcattggttgaagctg
ttctacttcggcgccgatgacggttcaggtctgttgccgattgttgacaacctcggcgag
atcgatgcccgcgaaattaactctgtgccgattgctgatggcatcaccttgcgggtagga
aagttcggaccctacttggagaaaccggtgccggccgacgcgccagaaggtaccgaaccg
gagcgagccaatgtgccggaagacctggcacctgacgagttgaccgctgagaaggctatt
gagctgatcaacaccgcagcgccggaagagcgcgtgctcggtgttgacccggagagcggg
cataccgtggtggcgaagaacggccgctacggtgcctacgtcaccgagctgattcccgaa
ccgagcgcggaagaactcgcgaatgcgccggtggagtactacaagaacggcaagccgaag
ccgccgaagaaaccggtcaaagcgaagccccgcaccggctccctatttgcctcaatgagc
gttgagacggtcacccttgaggaagcgctgcaattgatgtcgctgccgcgggtgcttggt
gccgacgccgaaggcgtcgaaatcaccgtgcagaacggccgcttcggcccttatctgaaa
aaggggactgactctcgttcgatcggctctgaggaagagattttcactatcaccctggag
caggcactggagatctactcgcagccgaagcagcgcggcacccgcgctgcggtgccgccg
ctagcagaattcggtgaggatccgacctcgggcaagaagatcgtcgtcaaagaaggccgg
ttcgggccatacatcaccgatggtgaaacgaacatcacggtgcctcgcggaacgtcaatt
gaagagttgactcgcgaacgggcgatcgaattgctggcggataagcgcgctcgcggcccg
gtgaaacggaccagttctcgggccaagacgagcactaagcggaagacagcggcgaagcgc
tag
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