KEGG   Psychromicrobium lacuslunae: UM93_12010
Entry
UM93_12010        CDS       T03775                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
ari  Psychromicrobium lacuslunae
Brite
KEGG Orthology (KO) [BR:ari00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ari03032]
    UM93_12010
   03036 Chromosome and associated proteins [BR:ari03036]
    UM93_12010
   03400 DNA repair and recombination proteins [BR:ari03400]
    UM93_12010
DNA replication proteins [BR:ari03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    UM93_12010
Chromosome and associated proteins [BR:ari03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    UM93_12010
DNA repair and recombination proteins [BR:ari03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      UM93_12010
SSDB
Motif
Pfam: Bac_DNA_binding DUF2267 HU-HIG GST_C HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AJT42051
UniProt: A0A0D4C137
LinkDB
Position
complement(2553012..2553314)
AA seq 100 aa
MAKNRSELVAEVAAKAETSQAAVNNVLDAVFSVFESSVAAGEKITIPGWLAVERTDRAAR
TGRNPQTGETIQIAAGHSVKLTAGSKLKAAVAKKAPAKKK
NT seq 303 nt   +upstreamnt  +downstreamnt
atggctaagaatcgtagtgagcttgttgctgaggttgctgccaaggctgagaccagccag
gctgcagtgaacaacgttttggatgcggttttctccgtattcgaaagctcagttgccgct
ggcgagaagatcaccatcccgggctggctcgcagttgagcgcaccgaccgtgcagctcgc
accggccgcaacccgcagaccggtgagaccattcagatcgccgctggccacagcgttaag
ctgaccgctggctccaagctgaaggctgccgttgcgaagaaggctccggccaagaagaag
taa

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