Psychromicrobium lacuslunae: UM93_16230
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Entry
UM93_16230 CDS
T03775
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ari
Psychromicrobium lacuslunae
Pathway
ari03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UM93_16230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ari03400
]
UM93_16230
Enzymes [BR:
ari01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
UM93_16230
DNA repair and recombination proteins [BR:
ari03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UM93_16230
Prokaryotic type
UM93_16230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AJT43215
UniProt:
A0A0D4C4A8
LinkDB
All DBs
Position
complement(3440026..3440718)
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AA seq
230 aa
AA seq
DB search
MSNDPLASISPDWAAALSGVEANLKAMGDFLNTEFIAAQQRDGGPGFLPAPKNVLRAFQQ
PLDQVKVLLVGQDPYPTFGHPIGLSFAVERHTKPLPRSLSNIYRELQDDLGIPPANHGDL
SSWSQQGVLLLNRVLSVRPGTPASHRGKGWEKITEAAIRALLARDKPLVALLWGNDARNL
TPLLGSTAIISSAHPSPLSASRGFFGSRPFSKINQLLERQGASGIDWTVR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaatgacccactcgccagcataagccctgactgggcggctgcactcagcggggtc
gaagcgaatctcaaagctatgggcgatttcttgaacaccgaattcatagccgcccagcaa
cgagacggcggtccaggcttcctgcccgcaccgaagaacgtattacgcgccttccaacaa
cccctcgaccaggtcaaagtactgctcgtcggtcaagatccctacccgaccttcggacat
ccgatcggcctctctttcgcggtggaacgacacaccaaaccactgccccgcagcctgagt
aatatctaccgcgaattgcaagatgacctcggcatcccaccggccaaccacggtgacctg
agcagctggtcgcaacagggagtcttactcttaaaccgggtactcagcgtacgccccggc
accccggcatcacaccgcggaaagggctgggaaaaaatcaccgaggccgccattcgcgcc
ctgctagcgcgagataaacctctggtcgcgctgctctgggggaacgatgcccggaacctc
acaccgttactgggttcgaccgcgattatcagctcggcccaccccagcccgctttcggct
tcgcggggcttcttcggctctcggccattcagtaagatcaatcagctcctagaacggcag
ggcgctagcggcattgattggaccgtacgctaa
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