Psychromicrobium lacuslunae: UM93_16305
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Entry
UM93_16305 CDS
T03775
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ari
Psychromicrobium lacuslunae
Pathway
ari03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UM93_16305
09124 Replication and repair
03420 Nucleotide excision repair
UM93_16305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ari03021
]
UM93_16305
03400 DNA repair and recombination proteins [BR:
ari03400
]
UM93_16305
Enzymes [BR:
ari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UM93_16305
Transcription machinery [BR:
ari03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
UM93_16305
DNA repair and recombination proteins [BR:
ari03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
UM93_16305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AJT42644
UniProt:
A0A0D4C281
LinkDB
All DBs
Position
complement(3453403..3455058)
Genome browser
AA seq
551 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHPDATEARHAIAAFAELERAPEHVHTYRLTPLGLWNARAAG
LDAEQVLDTLLKFSRFPVPHSLLLDIEETMSRYGRLRLEKDPVHGLVLRTDDFPVLEEVI
RAKKIGDLLGPRIDPMTVVVHSSQRGALKQLLLKIGWPAEDLAGYVDGTPHLIALNESTE
PGGWSLRPYQRLATENFWAGGSGVVVLPCGAGKTLVGAAAMATSSTTTLILVTNTLSARQ
WRDELLKRTSLTEGEIGEYSGQVKEVRPVTIATYQVLTTKRGGLYPHLELLDANDWGLIV
YDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGREGEVFSLIGPKRYDAPWKDIEAQG
YIAPADCVEVRVDLPKDERLAYAMADDADKYRLCSTSETKTDVVEQLVKLHRDDQLLVIG
QYIDQLDEIGERIDAPVIKGSTPVKERQRLFDAFRQGEVHTLVVSKVANFSIDLPEASVA
IQVSGSFGSRQEEAQRLGRLLRPKADGRSARFYTLVARDTMDQEFAARRQRFLAEQGYAY
RIMDAKDVGEA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggtccgctgatcgtgcaaagcgataagacggtgctgctggaggtcgatcat
cctgacgccaccgaggccagacacgccattgccgcctttgctgaactggaacgggcacct
gagcatgtgcacacttaccggctcaccccgctcggtctgtggaacgctcgggccgcggga
ttggatgccgaacaggtcctagacaccctgctgaagttctcccggttcccggtacctcat
tccttgctgctggatattgaagagaccatgagccgatatggccgactgcgcttagagaag
gacccggtgcacggcctggtgctgagaactgatgattttccggtgttggaggaagtcatc
cgagccaagaagatcggcgatctgctgggccctcggatcgatccaatgaccgtagtggtg
cactcctcccagcgtggcgcgctcaagcagttattgctgaaaatcggctggccagccgag
gacctggccggttacgtcgacggcaccccgcacctgattgcgctaaacgaatccaccgag
ccgggtggctggtcgttacgaccgtaccagcgactcgccaccgagaatttctgggcgggt
ggctcaggcgtcgtggtgctaccttgcggcgcaggtaaaaccttggtcggtgcagcggcg
atggcgaccagcagcaccaccaccctgatcctggtgaccaatacgctctccgctcggcaa
tggcgggatgagctactcaaacggacctcgctcaccgaaggcgaaatcggagagtactcc
ggacaggtcaaagaggtccgcccggtcactattgccacctatcaggtgctgaccacgaaa
cgtggcggcttgtacccgcacctcgagttgctggacgccaacgactggggcttgattgtc
tatgacgaagtgcacctgctgccggccccgatctttagaatgacagccgacttgcaggct
cgacgccggcttggcctgaccgccaccctggtgcgagaggacggcagggaaggtgaagtc
ttctccttgatcgggcctaaacgctacgacgcaccgtggaaagatatcgaggcacagggc
tatattgccccggcggactgcgtcgaagtccgagtggatctgcccaaggacgaacgactc
gcctacgcgatggcagacgatgcagataagtaccggctctgctcaaccagcgagacgaaa
accgacgtggttgagcaattggtcaaactccatcgagatgaccagttgctggtgatcggt
cagtacatcgaccagctcgatgagatcggcgagcgcattgacgccccggtgatcaagggg
agcaccccggtgaaggaaagacaacgactcttcgatgccttccggcaaggcgaagttcac
accttagtggtgtccaaggtcgccaacttctccattgacctgcccgaggcttcggtagct
attcaggtctccggatctttcggttcccggcaggaagaagcccagcgattgggccgcctg
ctgcgccccaaagccgatggacgctcggccaggttctataccttggtcgccagggacacc
atggatcaagagttcgccgcccgacggcaacgcttcttggccgagcagggttatgcctat
cgcattatggacgctaaagacgtcggcgaggcatag
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