Psychromicrobium lacuslunae: UM93_16470
Help
Entry
UM93_16470 CDS
T03775
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ari
Psychromicrobium lacuslunae
Pathway
ari03420
Nucleotide excision repair
ari03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UM93_16470
03430 Mismatch repair
UM93_16470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ari03400
]
UM93_16470
Enzymes [BR:
ari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UM93_16470
DNA repair and recombination proteins [BR:
ari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UM93_16470
MMR (mismatch excision repair)
Other MMR factors
UM93_16470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AJT42667
UniProt:
A0A0D4C1W7
LinkDB
All DBs
Position
3489446..3491815
Genome browser
AA seq
789 aa
AA seq
DB search
MDMLFDPSSSPSNPQRHDASSRIDAQELLHGLNPQQEAAVTHAGSALLIVAGAGSGKTRV
LSHRIAYLLATGRAHPGEILAITFTNKAAAEMRERIAALIGDRAKNMWISTFHSSCVRIL
RREASTVGLNSSFSIYDSADSLRLITLIAKGLDLDPKRFTPKSIQHKISALKNELIDDDS
FASTATDPFEQGVAEVYRGYTQRLRQANALDFDDLIAQTVWMFRAFPGVAEYYRRRFRHV
MVDEYQDTNHAQYALVREIVGEQPEQAELTVVGDSDQSIYAFRGADIRNIVEFEKDYPNA
RTIKLEQNYRSTQTILSAANAVIEKNPDRPVKRLWTAEGDGEKIIGYVAENEHEEARFIA
EEIDRLQDEENLRPGDVAIFYRTNAQSRSIEEILMRVGLPYRVVGGTRFYERKEIKDALA
YLRVLVNPEDDVNLRRILNEPKRGIGDRAEGAVAALAERERSSFMAALRRAEEAPAMATR
SLNAVAGFVKLIDDLTEVANSSGAATALEAVLEQTGYLEGLRASNDPQDESRVENLAELV
AVVREYERDNPEGSLTDFLEGVSLVADADQIPDAPGADTEAAVAEARRLGVVTLMTLHTA
KGLEFPVVFLTGMEHGIFPHARSATDAKELAEERRLAYVGLTRARQRLYLTRAEVRSLWG
QSQYNPASPFIDEVPATLIEWKREGTTRMIPSVGSSGFGRERYSGSYWGAGSSLGEGGKL
PASLSANKARVQPQKEVISVAVGDKVQHTSFGLGTVIAVEGSGDKTVAKVRFASEEKRLL
LRYAPLSKA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcttttcgacccgtcctcttcgccatcaaaccctcaacgccacgatgccagc
tcgcggatcgatgcgcaggaactattgcacgggctgaacccacagcaagaagccgccgtg
acgcatgccggttcagctttgctcatagtggccggtgctggttcgggcaagacacgggtg
ctgagccatcggatcgcctatttactggcgactggtagggcccacccgggtgagattctg
gcgattaccttcaccaataaggccgccgcggaaatgcgcgagcggatcgcggcgctaatc
ggcgaccgggcgaagaatatgtggatctctaccttccactcatcgtgtgtccgtattttg
cgtcgcgaagcgagcaccgtcggcctgaactccagtttctcgatctacgattccgccgac
agtttgcggctgatcaccctgattgccaaggggcttgatctcgatccgaaacgcttcaca
cccaaatcgatccagcacaagatttcggcactaaaaaatgagctgatcgacgacgatagc
tttgccagcaccgccaccgatcccttcgagcagggtgtcgctgaggtttaccgcggctac
acgcagcggctccggcaggcgaacgccctcgacttcgacgatttgatcgcgcagaccgtc
tggatgtttcgcgcctttcccggcgtggctgaatactatcggcgccgcttccgacatgtc
atggtcgatgagtatcaggacaccaaccatgcgcaatacgcactggtgcgcgaaattgtc
ggcgagcagcccgagcaggcagaactcaccgtggtgggtgactcggatcagtccatttac
gctttccgcggcgctgatatccgcaatatcgttgagttcgaaaaagactaccccaacgct
cgaaccattaaactcgagcagaattaccgctccacccagaccatcctgagcgccgcgaac
gcggtgattgaaaagaaccccgaccgtccggtaaaacgactctggacagccgaaggtgat
ggcgaaaagattatcggttatgtcgccgagaacgagcacgaggaagcccggttcattgcc
gaggaaattgaccggctgcaggacgaagagaaccttcggccaggggacgtcgccattttc
taccgaaccaatgcgcaaagccgctcgattgaagaaattctgatgcgggtcggcctaccc
tatcgagtggtgggcggcacccgattctacgagcgcaaggagattaaggatgcgctcgcc
tacctacgggtgctggtcaatccggaggacgacgtcaatctgcgccgcatcctgaacgaa
cccaagcgcggcattggggaccgtgccgaaggtgcggttgctgcgctcgccgaacgcgaa
cgttcctcctttatggcggcgctgcgtcgcgcggaggaagctccggcgatggcaacccga
agccttaacgccgttgcaggctttgtgaaactcattgatgatctgaccgaggtggccaat
agctctggcgctgccaccgccttggaagccgtgctggaacagactggctaccttgagggg
ctgcgcgccagcaacgatccgcaggatgagtcgcgggtggagaacttggccgagttggtc
gccgtggtgcgtgagtacgagcgggacaacccggaaggctcgctgactgatttcttggaa
ggggtctcgctggtcgccgatgccgatcagattcccgatgcaccgggtgccgataccgag
gctgcggttgctgaagccagaaggctcggcgtggtcaccctgatgacgctgcacaccgcg
aagggcttggaattcccagtggtgttcctgaccggaatggaacacggcattttcccgcac
gcccgatcggcgacggacgcgaaggagctggccgaggagcgcaggctcgcttatgtcggc
ctgactcgggcccggcagcgtctctatctcacccgggccgaggtcaggagcctgtggggg
cagagccaatacaacccggccagcccctttatcgacgaagtgccagccaccttgatcgag
tggaagcgggaggggaccactcgaatgattccttcggttggctcttcaggttttggtcgg
gaacgctattccggttcctattggggcgcgggcagctcgctgggcgagggcggcaagctg
ccggccagcctttccgcgaataaggcccgggtgcagccacagaaggaagttatttcggtg
gcggtaggcgataaggtgcagcacaccagcttcggcctgggtaccgtgatcgcggtggag
ggctccggcgataaaacagtggcgaaagttcgcttcgccagcgaggaaaaacgattgcta
ctgcgttacgcgccgttgagtaaagcgtag
DBGET
integrated database retrieval system
